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. 2012 Sep;78(17):6035–6050. doi: 10.1128/AEM.01457-12

Table 1.

Bacterial strains used for in silico analysis in this studya

Species Strain ID Biological source Geographical source Relevant characteristic Reference
Bacterial strains used in in silico analysis
    C. sakazakii ATCC BAA-894 Infant Tennessee, USA 32
    C. sakazakii 2151 CSF United States This study
    C. turicensis z3032 Blood Zurich, Switzerland 74
    C. malonaticus LMG 23826 Breast abscess United States 34
    C. dublinensis subsp. dublinensis LMG 23823 Milk powder production facility Dublin, Ireland 34
    C. dublinensis subsp. lactaridi LMG 23825 Milk powder production facility Zimbabwe 34
    C. dublinensis subsp. lausennensis LMG 23824 Water fountain Lausanne, Switzerland 34
    C. universalis NCTC 9529 Water London, England 34
    C. muytjensii ATCC 51329 Unknown Unknown 34
Additional bacterial strains used for experimental analysis
    C. turicensis 3032.2A C. turicensis z3032 cured of pCTU1 23
    C. sakazakii BAA-894.3 C. sakazakii ATCC BAA-894 cured of pESA3 23
    C. muytjensii E488 Unknown Lausanne, Switzerland Lacks pESA3-/pCTU1-like plasmid 23, 75
    C. muytjensii E456 Unknown Lausanne, Switzerland Lacks pESA3-/pCTU1-like plasmid 23, 75
    C. dublinensis subsp. dublinensis CDC 0743-75 Human, clinical Wisconsin, USA Lacks pESA3-/pCTU1-like plasmid 23
    C. sakazakii CDC 9363-75 Unknown New York, USA Lacks pESA3-/pCTU1-like plasmid 23
    C. muytjensii CDC 3523-75 Human, clinical Arizona, USA Harbors pESA3-/pCTU1-like plasmid 23
    Vibrio vulnificus UNCC913 Unknown Environmental Hydroxamate/catechol siderophores 73
    E. coli ESA-C01 E. coli EPI300 fosmid clone containing viuB-shiF and iucABCD-iutA from pESA3 43
    E. coli ESA-M04 E. coli EPI300 fosmid clone lacking viuB-shiF and iucABCD-iutA 43
a

Strain metadata for these and those screened by PCR can be found in PATRN (http://www.patrn.net). ID, identity; CSF, cerebrospinal fluid.