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. 2012 Sep;78(17):6262–6270. doi: 10.1128/AEM.01051-12

Table 4.

Factor loadings for component taxa for factors from principal component analysesa

PCA factor component Factor loading by antibiotic use in past 6 months
Yes No
Factor 1
    Streptococcus 51 [See factor 4]
    Rothia 71 87
    Neisseria 61
    Gemella 76 65
    Actinomyces 65 87
    Veillonella 84 88
    Granulicatella 85 89
    Bacteroidetesb 45
Factor 2
    Lactococcus 97 96
    Anoxybacillus 97 94
    Propionibacterium 48
    Enterobacteriaceaec 89 83
Factor 3
    Enhydrobacter 93 88
    Moraxellaceaec 92 85
    Gammaproteobacteriad 91 87
    Proteobacteriab 52
Factor 4
    Streptococcus [See factor 1] −49
    Corynebacterium 79 74
    Dolosigranulum 47
    Haemophilus −53 −55
    Pasteurellaceaec −56 −57
    Corynebacterineaee 83 77
a

A separate PCA was performed for each antibiotic group. Factor loadings are given for all components. Note that some taxa appear as a component for one group's factor but not for the other, e.g., Neisseria is a component of factor 1 for the antibiotic “yes” group but not for the “no” group.

b

Phylum.

c

Family.

d

Class.

e

Suborder.

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