Table 3.
Nodulation test on various leguminous plants and genotypic characterization by Southern hybridization of nodulation genes
| Bradyrhizobium strains | Nodulation ona: |
nod gene hybridizationb |
|||||||
|---|---|---|---|---|---|---|---|---|---|
| A. americana | G. max | Ar. hypogaea | V. radiata | M. atropurpureum | S. rostrata | nodA | nodB | nodC | |
| Divergent nod-containing strains | |||||||||
| SUTN1-2 | + | 0 | + | + | + | 0 | YL | CL | JL |
| SUTN1-3 | + | 0 | + | + | + | 0 | Y | CL | JL |
| SUTN1-4 | + | 0 | + | + | + | 0 | YL | CL | JL |
| SUTN1-6 | + | 0 | + | + | + | 0 | YL | CL | JL |
| SUTN1-8 | + | 0 | + | + | + | 0 | YL | CL | J |
| SUTN1-12 | + | 0 | + | + | + | 0 | J | CL | JL |
| SUTN1-13 | + | 0 | + | + | + | 0 | YL | CL | JL |
| SUTN2-1 | + | 0 | + | + | + | 0 | YL | CL | J |
| SUTN2-2 | + | 0 | + | + | + | 0 | YL | CL | JL |
| SUTN2-3 | + | 0 | + | + | + | 0 | YL | J | JL |
| SUTN2-4 | + | 0 | + | + | + | 0 | YL | CL | JL |
| SUTN4-3 | + | 0 | + | + | + | 0 | YL | CL | J |
| SUTN5-6 | + | 0 | + | + | + | 0 | YL | CL | JL |
| DOA1 | + | 0 | + | + | + | 0 | YL | CL | JL |
| DOA2 | + | 0 | + | + | + | 0 | YL | CL | JL |
| DOA3 | + | 0 | + | + | + | 0 | YL | CL | JL |
| DOA4 | + | 0 | + | + | + | 0 | YL | CL | JL |
| DOA6 | + | 0 | + | + | + | 0 | N | CL | JL |
| DOA7 | + | 0 | + | + | + | 0 | YL | CL | JL |
| DOA8 | + | 0 | + | + | + | 0 | N | CL | JL |
| DOA9 | + | 0 | + | + | + | 0 | N | CL | JL |
| DOA10 | + | 0 | + | + | + | 0 | YL | CL | JL |
| nod-containing strains | |||||||||
| SUTN1-7 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN1-9 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN3-1 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN4-1 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN5-1 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN5-3 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN5-5 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN6-1 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN6-2 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN7-1 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN7-2 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN8-1 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN8-2 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN9-1 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN9-2 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN9-3 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN9-4 | + | 0 | + | + | + | 0 | J | J | J |
| SUTN9-5 | + | 0 | + | + | + | 0 | J | J | J |
| USDA110 | 0 | + | + | + | + | 0 | J | J | J |
| nod-independent strains | |||||||||
| BTAi1 | 0 | 0 | + | 0 | 0 | 0 | N | N | N |
| ORS278 | 0 | 0 | + | 0 | 0 | 0 | N | N | N |
+, positive with effective nodule; 0, negative.
Southern blot hybridization signals are presented in Fig. S3 in the supplemental material. J, signal obtained from B. japonicum USDA110 under a stringent condition; YL, signal obtained from strain SUTN6-2 (99% 16S rRNA similarity to B. yuanmingense) under a low-stringency condition; CL, signal obtained from strain SUTN7-2 (99% 16S rRNA similarity to B. canariense) under a low-stringency condition; JL, signal obtained from B. japonicum USDA110 under a low-stringency condition and from strains SUTN6-2 and SUTN7-2 under a stringent condition; N, not detected.