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. 2012 Aug 10;7(8):e42371. doi: 10.1371/journal.pone.0042371

Figure 9. Screen shots of four different macronuclear genes from the Oxytricha macronuclear genome browser.

Figure 9

In each panel, black boxes on top are a BLAT alignment of individual MDS sequences to show MDS junction location. Short match below that shows telomeric repeat locations. The red bar below that shows the nanochromosome contig extent. Blue and orange bars indicate the alignment location of 26–28 nt long small RNAs from the mat24_06 library. Plus strand alignments are in blue and minus strand alignments are in orange. A. DNA Polymerase Alpha. Note that this nanochromosome is incompletely assembled and is spread across three partially assembled contigs on chr2. B. Beta Telomere Binding Protein. C. Actin-I. D. CCCH Zinc Finger protein.