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. 2012 Aug 10;7(8):e42696. doi: 10.1371/journal.pone.0042696

Table 2. Characteristics of SNPs analysed in this study.

SNP HWp-value Minor allele frequency Alleles GenBankaccession series Primers 5′ → 3′
rs174546 0.201 0.369 C:T JQ773028–JQ773088 F: TCACCAACTACCTGCATGTGCCA
R: TGCTGTCAGCCTTCGCCGACAT
rs174548 0.167 0.27 C:G JQ773089–JQ773142 F: TACCTGGGTGGAAACCCAGTCCA
R: TGAAGGGGACATGCAAGAAGGGC
rs174549 0.167 0.27 G:A JQ773089–JQ773142 F: TACCTGGGTGGAAACCCAGTCCA
R: TGAAGGGGACATGCAAGAAGGGC
rs174555 0.118 0.336 T:C JQ773200–JQ773260 F: TGGGCAATGTCAGTGGTGGGGA
R: ACAGATGAGTTCCGGGAGCTGC

Minor allele frequencies were comparable to those specified in the CEU HapMap dataset and did not violate Hardy Weinberg equilibrium (HW p-value).