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. 2012 Aug 15;7(8):e43506. doi: 10.1371/journal.pone.0043506

Table 1. Sequenced Alpha-Proteobacterial strains containing GTA gene cassettes and screened for GTA production over time.

Isolate Name ATCC strain number Maximum GTA production Genome Accession Number (Refseq) Locus tag- GTA Terminase/GTA ORF 15 Growth Media Preferred temp
Rhodobacter capsulatus SB1003WT Gift from Oregon State University yes (type strain, 105 gene transfer units ml−1), Solioz et.al., 1975 NC_ 014034 RCAP_rcc01683 RCAP_rcc01698 PYE, YPS, LB or OM 30°C aerobic, or anaerobic with light
Roseobacter denitrificans OCH114 ATCC® 33942TM not observed NC_ 008209 RD1_3034 RD1_3016 Marine Broth 2216 26°C aerobic
Oceanicola granulosus HTCC2516 ATCC® BAA861TM yes, (2.9×106 ml−1) NZ_ AAOT00000000 OG2516_04279 OG2516_04219 Marine Broth 2216 30°C aerobic
Roseovarius nubinhibens ISM ATCC® BAA591TM yes, (1×109 ml−1) NZ_ AALY00000000 ISM_05135 ISM_05210 Marine Broth 2216 30°C aerobic
Ruegeria (Silicibacter) pomeroyi DSS-3 ATCC® 700808TM yes, (×108 ml−1) Biers et.al., 2008 NC_ 003911 SPO2266 SPO2250 Marine Broth YTSS 28°C aerobic
Oceanicaulis alexandrii Gift from Oregon State University not observed NZ_ AAMQ00000000 OA2633_14805 OA2633_14855 Marine Broth 2216 20°C aerobic
Aurantimonas manganoxydans SI85-9A-1 ATCC® BAA-1229 not observed NZ_ AAPJ00000000 SI859A1_01033 SI859A1_08129 #2584 Broth: buffered marine media with Mn 30°C aerobic
Parvularcula bermudensis ATCC® BAA594TM pending NC_ 014414 PB2503_08059 PB2503_08129 Marine Broth 2216 30°C aerobic
Nitratireductor , strain 44B9s Isolated from Symbiodinium associated with a Gorgonian yes (2×109 ml−1) N/A N/A Marine Broth 2216 26°C aerobic
Ruegeria mobilis, strain 45A6 Isolated from a Clade D2 Symbiodinium associated with a Foraminifera yes (1×109 ml−1) Pending Pending Marine Broth 2216 26°C aerobic

The strains screened for this study are indicated in bold type. Maximum abundance of GTA particles observed in parentheses.