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. Author manuscript; available in PMC: 2012 Aug 16.
Published in final edited form as: Curr Protoc Immunol. 2001 May;CHAPTER:Unit–7.31. doi: 10.1002/0471142735.im0731s20

Table 7.31.1.

Troubleshooting Guide for Isolation by Negative Selection of Human Eosinophils

Problem Possible cause Solution
Mononuclear cell contamination Poor layering on density solution Check technique of overlaying onto Ficoll-Paque
Density separation disrupted by braking Make sure the centrifuge brake is off during density centrifugation
Mononuclear layer incompletely aspirated Check technique of aspirating off the mononuclear layer after Ficoll-Paque centrifugation
Neutrophil (or mononuclear cell) contamination Not enough antibody added Use proper amount of antibody
Antibody cocktail and/or magnetic colloid are expired Use fresh antibody cocktail and/or magnetic colloid
The column was overloaded Load fewer cells or use two columns
Excessive flow rate through column applied (may result in a brown- tinged pellet due to the presence of magnetic colloid) Reload the eluted cells onto the column and apply the recommended flow rate
Red blood cell contamination Sedimentation and antibody cocktail are inadequate to eliminate red blood cells Use red blood cell lysis protocol
Platelet contamination Blood drawn with small- bore needle Use 19-G needle
Blood drawn with vigorous traction applied to syringe plunger Draw blood more gently
Not enough anticoagulant used Increase anticoagulant
Ice-cold HBSS was not calcium- and magnesium-free Prepare HBSS properly
Poor cell viability Improper solution pH or contaminated solutions or column. Prepare new solutions; carefully wash the re-used column according to manufacture instructions.