Table 3.
Prevalence of STs among H. cinaedi isolates from 7 hospitals in Japan
| Strains | Hospital or host | City or country | No. of isolates | Clonal complex [sequence type (no. of isolates)] |
|---|---|---|---|---|
| Clinical isolates from Japan (n = 18) | A | Sapporo | 12 | CC1 [ST2 (1)], CC9 [ST10 (3), ST11 (8)] |
| B | Tokyo | 2 | CC4 [ST4 (2)] | |
| C | Tokyo | 6 | CC4 [ST4 (1)], CC8 [ST8 (5)] | |
| D | Tokyo | 6 | CC1 [ST3 (2)], CC4 [ST5 (1), ST6 (1)], CC9 [ST10 (2)] | |
| E | Tokyo | 3 | CC4 [ST6 (3)] | |
| F | Tokyo | 4 | CC4 [ST6 (4)] | |
| G | Tokyo | 17 | CC4 [ST6 (1)], CC7 [ST7 (12)], CC9 [ST9 (3), ST10 (1)] | |
| Reference strains | ||||
| CCUG18818 | Human | USA | 1 | CC1 [ST1] |
| CCUG18819 | Human | USA | 1 | CC1 [ST1] |
| CCUG43521 | Human | Australia | 1 | CC4 [ST4] |
| MIT 99–5914 | Human | USA | 1 | CC12 [ST12] |
| MIT 00–5433 | Rhesus monkey | USA | 1 | CC13 [ST13] |
| MIT 01–5001 | Rhesus monkey | USA | 1 | CC14 [ST14] |