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. 2012 Aug 17;7(8):e41762. doi: 10.1371/journal.pone.0041762

Table 1. Candidate Dgcr8-independent miRNAs.

Dgcr8 independent miRNA candidates Enzymatic Dependency observed Fold Change Still in miRBase v18 Reason cited in miRBase for removal*
mmu-miR-1186 This study 0.985 Yes
mmu-miR-2142 This study 0.950 No “fragment of 5S rRNA” This study
mmu-miR-805 This study 1.186 No “overlaps a Mt tRNA”
mmu-miR-1274a This study 0.948 No “fragment of a Lys tRNA (Schopman et al.)1
mmu-miR-1937a This study 1.500 No “fragment of tRNA”
mmu-miR-1937b This study 1.516 No “fragment of tRNA”
mmu-miR-2132 This study 1.174 No “fragment of rRNA (Chiang et al.)2
mmu-miR-2143 This study 1.447 No “fragment of 28S rRNA”
mmu-miR-2141 This study 0.897 No “fragment of rRNA (Chiang et al.)2
mmu-miR-720 Babiarz et al. 1.178 Yes
mmu-miR-1983 Babiarz et al. 4.324 Yes
mmu-miR-320 Babiarz et al. 2.172 Yes
mmu-miR-122 Babiarz et al. 0.519 Yes
mmu-miR-484 Babiarz et al. 1.581 Yes
mmu-miR-1981 Babiarz et al. 5.821 Yes
mmu-miR-344 Babiarz et al. 0.645 Yes
mmu-miR-877 Babiarz et al. 3.105 Yes
mmu-miR-668 Babiarz et al. 0.688 Yes
mmu-miR-702 Babiarz et al. 1.421 Yes
mmu-miR-1982 Babiarz et al. 0.995 Yes
mmu-miR-689 Babiarz et al. 0.631 No “fragment of rRNA (Chiang et al.)2
mmu-miR-699 Babiarz et al. NA No “fragment of RNase MRP RNA”

Presented are the candidate Dgcr8-independent miRNAs alongside those identified as Dgcr8-independent by Babiarz et al. [25]. Included is the fold change of each miRNA seen in this study between heterozygous and Dgcr8-depleted cell lines (bold italics if they meet our fold change threshold) and the status of each miRNA in miRBase version 18.

*

Reasons for removal from miRBase (http://www.mirbase.org/) as given in miRBase, except for miR-2142, which was identified for removal by this study (1 [42], 2 [41]).