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. Author manuscript; available in PMC: 2013 Jun 21.
Published in final edited form as: J Chem Inf Model. 2012 Mar 26;52(4):1046–1060. doi: 10.1021/ci200620h

Figure 6.

Figure 6

Hydration sites identified in the active site of HIV protease (left) and pcDHFR (right). Hydration sites that contribute both entropically and enthalpically when replaced by ligands are shown in blue. The hydration sites whose entropic gain surpasses the enthalpic loss when replaced by ligands are shown in purple. The hydration sites whose enthalpic loss is larger than the entropic gain when replaced by ligands are shown in orange. Some of the interactions between specific hydration sites and protein residues that are discussed in the text are shown as red dashed lines.