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. 2012 May 18;27(5):589–597. doi: 10.1093/mutage/ges024

Table I.

Comparison of the BPdG levels measured in DNA from BP-treated MCF-7 cells by BPDE–DNA SCIA and 32P-postlabelling

Purification methods SCIAa, mean ± SD adducts per 108 Mean % CV1 (within-day) Mean % CV2 (inter-day) 32P-postlabellingb, mean ± SD adducts per 108 Mean % CV1 (within-day) Mean % CV2 (Inter-day) Ratioc P1 P2
Phenol extraction 1162 ± 256 20.7 8.9 1682 ± 496 27.0 26.3 0.7 0.11 0.27
Qiagen columns 871 ± 92 10.25 6.5 2048 ± 340 40.3 15.7 0.4 <0.01 <0.01
Salting out 799 ± 104 11.95 9.3 1712 ± 308 16.3 12.8 0.5 <0.01 0.05

%CV1 refers to the within-day coefficient of variance for adduct levels measured by either method in independently extracted DNA samples, while %CV2 refers to the inter-day coefficient of variance of the same samples analysed twice or three times on different days; P1: P value for independent t-test for the inter-day mean adducts levels obtained by the two methods; P2: P value for paired t-test.

a

Triplicate DNA samples were extracted by the three methods and assayed independently twice.

b

Triplicate DNA samples were extracted by the three methods and assayed independently three times.

c

Ratio of adduct levels measured by SCIA to those measured by 32P-postlabelling.