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. 2012 Aug;47(2):234–244. doi: 10.1165/rcmb.2012-0026OC

TABLE 1.

GENES WITH NONSYNONYMOUS SINGLE-NUCLEOTIDE POLYMORPHISMS ASSOCIATED WITH CHLORINE SURVIVAL TIME

Name of Gene Chromosome Position (Base Pairs) Association dbSNP −log(P) Nonsynonymous dbSNP Exon Amino Acid Substitution Phenotype (%) Allele Frequency
Tns1 1 72920639 rs3021883 4.1 rs40124058 19 L944V 20.1 30.5
rs36340401 35 N1882S 20.3 30.5
Slco4c1 1 98701146 rs13476000 5.6 rs37471241 13 T707A 16.3 37.6
Ikbkap 4 56426555 rs32078659 4.8 rs27869828 11 I345V 11.3 24.5
rs27869847 18 G662V 11.3 24.5
rs27835086 36 A1309V 17.7 23.4
Ncor2 5 125502713 rs33262018 4.2 rs36571333 44 T2229A 14.4 24.2
Aacs 5 125996775 rs29541719 4.6 rs38516850 1 Q5R 20.0 28.1
rs36769124 9 T321I 20.0 28.1
Fry 5 151155327 rs3684936 4.1 rs50343365 22 T2568A 13.5 19.1
Cyp11a1 9 58075842 rs3674363 5.0 rs47078233 9 N522D 13.7 14.1
Ttk 9 84014785 rs30022241 4.9 rs33070516 9 *302L 11.6 47.8
rs33070518 9 T306P 11.6 47.8
Tnfrsf19 14 61611931 rs30388803 4.4 rs37583013 9 T342A 14.4 40.0
rs37057546 9 N286D 14.4 40.0
Slc38a4 15 96687641 rs32255071 6.3 rs46306226 16 N544S 12.6 17.9
Slc35a5 16 45150868 rs4180445 4.1 rs32739736 6 H403R 12.0 48.1

Definition of abbreviations: Tns1, tensin 1; Slco4c1, solute carrier organic anion transporter family, member 4C1; IkbKap, inhibitor of kappa light polypeptide enhancer in B cells; Ncor2, nuclear receptor co-repressor 2; Aacs, acetoacetyl coenzyme A synthetase; Fry, furry homolog; Cyp11a1, cytochrome P450 family 11, subfamily A, polypeptide 1; Ttk, Ttk protein kinase; Tnfrsf19, tumor necrosis factor receptor superfamily, member 19; Slc38a4, solute carrier family 38, member 4; Slc35a5, solute carrier family 35, member 5; dbSNP, Single Nucleotide Polymorphism Database at NCBI; rs number, dbSNP reference sequence.