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. 2012 Aug 21;7(8):e41877. doi: 10.1371/journal.pone.0041877

Table 1. Cowpea bruchid midgut genes coregulated by bergapten and scN.

Category Accession# Putative Function (Abbreviation) Fold changea
Bergapten scN
Sugar Metabolism
FK668918 alpha-Amylase (AMY1) 0.43 2.14
FK668899 alpha-Glucosidase (AGL1) 0.26 2.90
FK668900 alpha-Glucosidase (AGL2) 0.47 2.46
FK668901 alpha-Glucosidase (AGL3) 0.37 3.05
FK668902 alpha-Glucosidase (AGL4) 0.18 2.11
FK668936 beta-1,4-Mannanase 1 (MAN2) 0.13 3.69
FK668881 beta-Galactosidase (BGL2) 0.46 9.28
FK668883 beta-Galactosidase (BGL4) 0.40 5.41
FK668907 beta-Glucosidase (BGA4) 0.40 2.18
FK668908 beta-Glucosidase (BGA5) 0.27 2.48
FK668909 beta-Glucosidase (BGA6) 0.11 2.07
FK668910 beta-Glucosidase (BGA7) 0.49 4.52
FK668911 beta-Glucosidase (BGA8) 0.43 6.19
FK668914 beta-Glucosidase (BGA11) 0.41 3.61
FK668915 beta-Glucosidase (BGA12) 0.25 2.37
FK669587 Glycoside hydrolase family protein 5 (GH5) 0.16 3.81
GW917132 Glycoside hydrolase family protein 28 (GH28-1) 0.23 2.28
FK668916 Glycosyl hydrolase family 31 protein (GH31-1) 0.38 2.51
FK668917 Glycosyl hydrolase family 31 protein (GH31-2) 0.32 2.64
GW917355 Mitochondrial enolase superfamily member 1 (ENOSF1b) 0.29 6.95
FK668996 Pectate lyase (PEL2) 0.45 2.02
FK668897 beta-Mannosidase A (MANBA) 8.65 0.01
Protein metabolism
FK668971 Carboxypeptidase, vitellogenic-like (CPVL1) 0.37 3.79
FK668961 Cathepsin B (CatB6) 0.19 3.40
FK668962 Cathepsin B (CatB7) 0.31 2.20
FK668948 Cathepsin L (CatL1) 0.36 2.39
FK668951 Cathepsin L (CatL4) 0.27 4.90
FK668952 Cathepsin L (CatL5) 0.29 4.03
FK668953 Cathepsin L (CatL6) 0.32 3.77
FK669001 Cystathionine beta-lyase (CBL2) 6.00 0.45
FK669322 Eukaryotic translation initiation factor 4 gamma 2 (eIF4G2-1) 2.53 0.44
FK669004 Glutaminyl-peptide cyclotransferase (QPCT) 0.47 2.84
FK669330 HBS1/Elongation factor 1 alpha-like protein (HBS1) 6.94 0.09
FK669008 Homocysteine S-methyltransferase (HMT) 2.28 0.46
FK669005 Phosphoserine aminotransferase (PSAT1-1) 3.35 0.24
FK669006 Phosphoserine aminotransferase (PSAT1-2) 2.00 0.34
FK669007 Phosphoserine aminotransferase (PSAT1-3) 3.13 0.25
FK668974 Plasma glutamate carboxypeptidase (PGCP1) 0.39 2.70
FK668976 Plasma glutamate carboxypeptidase (PGCP3) 0.49 3.22
FK669010 Prolyl-4-hydroxylase-alpha EFB (PH4alphaEFB1) 4.31 0.02
FK669011 Prolyl-4-hydroxylase-alpha EFB (PH4alphaEFB2) 4.71 0.02
FK668967 Retinoid-inducible serine carboxypeptidase (RISC2) 0.46 2.04
FK668979 Trypsinogen RDOT3 (RDOT3) 0.35 3.34
Lipid metabolism
FK669017 24-Dehydrocholesterol reductase (DHCR24-1) 0.45 2.31
FK669019 24-Dehydrocholesterol reductase (DHCR24-3) 0.49 2.29
FK669021 Aldo-keto reductase (AKR1) 0.35 2.48
FK669046 Glucosylceramidase (GBA) 0.47 4.14
Other metabolism
FK669060 5-Oxoprolinase (ATP-hydrolysing) (OPLAH) 0.44 2.20
FK669054 Glyoxylate reductase hydroxypyruvate reductase (GRHPR) 0.44 3.52
Transport
FK669075 Solute carrier family facilitated glucose transporter member 8 (GLUT1) 0.45 2.63
FK669446 Solute carrier family facilitated glucose transporter member 8 (GLUT3) 2.31 0.18
FK669068 Sugar transporter (SUT1) 2.17 2.27
FK669069 Sugar transporter (SUT2) 0.45 2.26
FK669103 Vacuolar H ATPase 100-2 (VHA100-2) 3.27 0.04
Signaling/Transcriptional regulation
FK669149 Klotho (Klotho) 0.12 2.62
Detoxification
FK669179 Catalase (CAT1) 2.85 0.24
FK669180 Catalase (CAT2) 3.01 0.31
FK669165 Cytochrome P450 (CYP6G1-2) 4.65 0.39
FK669166 Cytochrome p450 (CYP6G1-3) 8.06 0.37
FK669192 Esterase-6 precursor (EST2) 0.43 2.23
FK669177 Glutathione S-transferase (GST) 3.48 0.48
FK669176 Peroxidase precursor (POD) 0.20 0.32
Ubiquitination
FK669204 Ubiquitin-conjugating enzyme E2-17 kDa (E2(17)KB) 2.50 0.35
Defense
FK669230 Drosomycin-like I (DrsL1-1) 18.97 0.03
FK669231 Drosomycin-like I (DrsL1-2) 21.75 0.02
Development
FK669269 Extramacrochaetae protein (EMC) 2.11 0.41
FK669260 Juvenile hormone esterase (JHE7) 0.36 2.04
FK669270 Laccase 2 (LAC2) 3.40 0.09
Neuronal function
FK669050 AMP-dependent CoA ligase (CL) 2.33 0.15
FK669281 Synaptic vesicle membrane protein VAT-1 homolog (VAT1-1) 2.03 0.21
FK669282 Synaptic vesicle membrane protein VAT-1 homolog (VAT1-2) 2.18 0.12
Cellular function
FK669309 Actin binding protein (ABP2) 3.59 0.15
FK669368 CD9 antigen (CD9-2) 3.41 0.32
FK669316 Failed axon connections (FAX) 2.72 0.14
FK669354 Guanosine monophosphate reductase (GMPR) 2.13 0.17
FK669332 LIM domain protein (LIM2) 2.32 0.17
FK669357 Lysosomal acid phosphatase 2 (LAP1) 0.46 9.50
FK669306 Tubulin-specific chaperone a (TBCA) 2.08 0.42
FK669348 40 kDa salivary protein SP11 (SP11) 0.16 5.92
Other functions
FK669624 BCL2 adenovirus e1b 19 kda protein-interacting (BNIP3L) 2.03 0.36
a

: Numbers shaded gray indicate genes down-regulated by two-fold or more (P≤0.05) in response to dietary bergapten or scN, Unshaded are up-regulated, and underlined indicate the genes are induced or repressed by both bergapten or scN.