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. 2012 May 8;40(15):7442–7451. doi: 10.1093/nar/gks383

Table 1.

Apparent TGT dissociation constants

RNA 3′end RNAP Fluorophore KTGT (μM)
base\sugar rRiboside 2′-Ddeoxy 3′-Deoxy
Adenine Wild-type 6-MI i − 8 → i − 7 0.13 ± 0.04 2.1 ± 0.9 0.84 ± 0.38
Cytosine Wild-type 6-MI i − 8 → i − 7 0.11 ± 0.04 3.8 ± 1.1 1.1 ± 0.7
Guanine Wild-type 6-MI i − 8 → i − 7 0.18 ± 0.05 3.6 ± 1.0 1.3 ± 0.3
Uracil Wild-type 6-MI i − 8 → i − 7 0.050 ± 0.001 2.8 ± 0.6 2.5 ± 0.2
Adenine Wild-type 2-AP i + 1 → i + 2 0.15 ± 0.05 2.3 ± 0.6 1.7 ± 0.5
Adenine Wild-type 2-AP i → i + 1 (RNA) 0.12 ± 0.10
Adenine β′M932A 6-MI i − 8 → i − 7 0.65 ± 0.16
Adenine β′R933A 6-MI i − 8 → i − 7 1.64 ± 0.45
Adenine β′H936A 6-MI i − 8 → i − 7 0.94 ± 0.15

Errors are standard deviations of the best-fit estimates and were calculated by nonlinear regression of TEC fluorescence versus TGT concentration data using the model described in Supplementary Methods.