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. 2012 May 29;159(4):1545–1570. doi: 10.1104/pp.112.196717

Table II. Lignin-associated changes in wild-type and ir-CAD plants when grown under PF and UF environments in their native habitat in southwestern Utah.

Values are means ± se. Asterisks indicate significant differences among the genotypes (paired t test: * P < 0.05, *** P < 0.001); n = 5 for transcript abundance quantification and enzymatic activity analysis, and n = 3 for all lignin analyses. n.d., Not detected.

Parameter Sample
PF Wild Type PF ir-CAD UF Wild Type UF ir-CAD
Gene (transcript abundance %; relative to GH wild type; apical stem)
NaCAD 123.63 ± 15.61 4.40 ± 1.06*** 119.82 ± 13.20 3.43 ± 0.31***
NaCAD1 102.49 ± 12.03 6.55 ± 1.83*** 87.50 ± 25.31 7.49 ± 2.49***
Enzyme (nkat mg-1 protein; apical stem)
 CAD activity 0.38 ± 0.02 0.036 ± 0.01*** 0.3 ± 0.05 0.025 ± 0.00***
 SAD activity 0.27 ± 0.03 0.03 ± 0.01*** 0.25 ± 0.04 0.019 ± 0.01***
Lignin composition
 Thioacidolysis-released (β-O-4-linked) monomers (µmol g-1 Klason lignin); basal stem and NMR data
  H units 51.43 ± 4.25 34.28 ± 11.45 96.48 ± 13.94 59.12 ± 29.82
  G units 1,119.20 ± 84.10 447.97 ± 62.24*** 919.12 ± 102.63 487.50 ± 82.16***
  S units 2,467.49 ± 82.30 304.10 ± 54.39*** 2,401.2 ± 268.58 582.71 ± 182.75***
  S/G (thio) 72.3:27.7 54.4:45.6
  S/G (thio) 2.20 0.67 2.61 1.20
  S/G (NMR) 56:44 48:52
  S/G (NMR) 1.28 0.91
  Coniferaldehyde n.d. 7.83 ± 1.35 n.d. 11.07 ± 1.47
  Sinapaldehyde n.d. 48.97 ± 2.90 n.d. 53.48 ± 7.23
 End group monomers (thioacidolysis)
  Vanillin n.d. 6.02 ± 0.50 n.d. 2.16 ± 0.08
  Syringaldehyde n.d. 32.43 ± 2.01 n.d. 14.27 ± 1.27
Klason lignin content (%; basal stem) 26.07 ± 1.99 27.84 ± 3.27 26.60 ± 1.13 25.27 ± 1.56