Table 3.

Oligonucleotides used in this study

Gene	Purpose	Sequence
YOR387C	S1 nuclease assay	5′-TTATTACAAGTGACGTTAGTCAAATCAAA TCTGACGGCTGCCATGGT-3′
ZRT1	SQ-PCR/ChIP1	5′-CAATACACCCGTACTCTCTTGCCTGT-3′
ZRT1	SQ-PCR/ChIP	5′-TGCTCTCAACCTACTTTCCATGAC-3′
CMD1	SQ-PCR/ChIP	5′-CCTCCAATCTTACCGAAGA-3′
CMD1	SQ-PCR/ChIP	5′-GCGGGAGCAAAAAATCACA-3′
ZPS1	SQ-PCR/ChIP	5′-GCCGTTTCTTTTTGGGCAGTA-3′
ZPS1	SQ-PCR/ChIP	5′-GCCTTTAAAAACAGCGCTTCC-3′
ZRT1	RT-PCR/ChIP2	5′-CGCGCGCCAGATAACTAAAA-3′
ZRT1	RT-PCR/ChIP	5′-ACCGCACAGATGAGAACCTTG-3′

¹Used for semi-quantitative PCR analysis of chromatin immunoprecipitation (Fig. 4).

²Used for quantitative real-time PCR analysis of chromatin immunoprecipitation (Figs. 5 and 6).