Table 3.
Co-occurrence of human-associated markers in the Doheny and Avalon Beach samples
| Beach | Marker A | Marker B | % matching results | No. of samples positive |
|
|---|---|---|---|---|---|
| Marker A | Marker B | ||||
| Doheny | HPyVsa | M. smithii | 95.4 | 5 | 1 |
| HPyVsa | HPyVsb | 93.9 | 5 | 9 | |
| M. smithii | Adenovirus | 93.8 | 1 | 9 | |
| HPyVsb | M. smithii | 92.3 | 9 | 1 | |
| HPyVsa | Adenovirus | 90.8 | 5 | 9 | |
| HPyVsb | Adenovirus | 89.2 | 9 | 9 | |
| H-Bacc | Adenovirus | 83.1 | 25 | 9 | |
| H-Bac | M. smithii | 81.5 | 25 | 1 | |
| HPyVsb | H-Bac | 80.0 | 9 | 25 | |
| HPyVsa | H-Bac | 78.5 | 5 | 25 | |
| Avalon | M. smithii | Adenovirus | 98.3 | 2 | 0 |
| HPyVsa | HPyVsb | 87.5 | 21 | 22 | |
| HPyVsa | Adenovirus | 82.5 | 21 | 0 | |
| HPyVsb | Adenovirus | 81.7 | 22 | 0 | |
| HPyVsb | M. smithii | 81.7 | 22 | 2 | |
| HPyVsa | M. smithii | 80.8 | 21 | 2 | |
| H-Bac | Adenovirus | 65.0 | 42 | 0 | |
| H-Bac | M. smithii | 65.0 | 42 | 2 | |
| HPyVsb | H-Bac | 56.7 | 22 | 42 | |
| HPyVsb | H-Bac | 55.8 | 21 | 42 | |
a
HPyVs, human polyomaviruses detected by qPCR.
b
HPyVs, human polyomaviruses detected by PCR.
c
H-Bac, human-associated Bacteroides marker.