. 2012 Jul;12(7):648–658. doi: 10.1089/ast.2011.0694

Table 1.

Apparent Taxonomic Distribution of Metagenome Sequences

	Red mat all reads^a	Red mat rRNA^b	Green mat all reads^a	Green mat rRNA^b
Bacteria	97.96	93.95	95.15	92.87
Proteobacteria	76.52	70.33	36.27	36.48
Cyanobacteria	11.24	1.61	18.19	7.30
Firmicutes	4.31	10.9	12.91	19.24
Bacteroidetes	3.86	3.53	9.99	7.30
Actinobacteria	0.65	1.51	2.59	1.33
Chloroflexi	0.45	0.1	3.75	2.16
Planctomycetes	0.12	0	1.28	1.66
Verrucomicrobia	0.11	0	1.75	0.33
Chlorobi	0.1	0	1.99	0.17
Archaea	0.26	0.00	2.06	0.66
Eukaryota	1.78	6.05	2.79	6.47
Number of reads	105,549	991	94,009	603

^{^a}

Metagenome affiliation was obtained by using the Metagenome RAST server (Meyer et al., 2008). Only the most common phyla are shown.

^{^b}

Reads identified as LSU and SSU rRNA genes.