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| Cryptosporidium species | Number of sequences | Number of sites | No. of polymorphicsites, S | No. of haplotypes, h | Haplotype diversity, Hd | Nucleotide diversity, Pi | Average number of nucleotide differences, k |
| C. muris | 25 | 2056 | 59 | 4 | 0.677±0.075 | 0.00734 | 14.24 |
| C. andersoni | 54 | 2142 | 4 | 5 | 0.384±0.079 | 0.00024 | 0.477 |
