Table 3.
DSC-Derived Thermodynamic Parameters for the Melting of the G, 8-oxoG, and Gh-Containing Duplexesa
| Duplex | Tmb (°C) | ΔH°calc (kcal/mole) | ΔS°calc (cal/(mole•K)) | ΔG°calc,d (kcal/mole) | ΔTm (°C) | ΔΔH°cal (kcal/mole) | ΔΔS°cal (cal/(mole•K)) | ΔΔG°cal (kcal/mole) |
|---|---|---|---|---|---|---|---|---|
| G | 64.3 ± 0.2 | 103 ± 2 | 305 ± 6 | 9 ± 0.5 | - | - | - | - |
| 8-oxoG | 63.2 ± 0.1 | 101 ± 2 | 299 ± 5 | 8 ± 0.4 | −0.9 | NDe | NDe | NDe |
| Gh | 47.7 ± 0.1 | 62 ± 6 | 193 ± 18 | 2 ± 0.3 | −16.6 | −41 | −112 | −7 |
DNA in 10 mM sodium phosphate, 100 mM NaCl, 0.1 mM EDTA, pH 7.0.
Tm reported for a duplex concentration of 32 μM.
Derived from DSC thermograms in a model-independent manner as described in the experimental section.
Value at 37 °C.
Not statistically different from G-containing duplex.