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. 2012 Aug 27;7(8):e42678. doi: 10.1371/journal.pone.0042678

Table 4. Main REACTOME [28] pathways enriched in differentially expressed genes.

Un-adjusted probability REACTOME Pathways Gene ID
1.13E-03 Activation of ATR in response to replication stress RFC2, RAD17, CDC25A,
ORC5L, CDC6, CDC25C,
MCM4
2.53E-03 Cholesterol biosynthesis HMGCR, HMGCS1, TM7SF2,
NSDHL, GGPS1
2.81E-03 G2/M Checkpoints RFC2, RAD17, CDC25A,
ORC5L, CDC6, CDC25C,
MCM4
5.92E-03 Phospholipase C-gamma1 binds to the activated EGF receptor PLCG1, EGFR
5.92E-03 EGFR activates PLC-gamma1 by phosphorylation PLCG1, EGFR
5.92E-03 Active PLC-gamma1 dissociates from EGFR PLCG1, EGFR
5.92E-03 EGFR interacts with phospholipase C-gamma PLCG1, EGFR
1.48E-02 Myosin regulatory light chain phosphorylation by ROCK ROCK1, ROCK2, MYH10
1.86E-02 PLC-gamma binds to the active receptor PDGFRB, PLCG1
1.86E-02 PLC-gamma hydrolyses PIP2 PDGFRB, PLCG1
1.86E-02 ROCK activation by Rho ROCK1, ROCK2
1.86E-02 CREB phosphorylation through the activation of Adenylate Cyclase ADCY8, CREB1
2.07E-02 DNA Repair POLB, APEX1, RFC2,
POLR2F, POLR2I, BRCA1,
FANCI, RAD51,RAD52,
POLR2C
2.43E-02 MAPK targets/Nuclear events mediated by MAP kinases DUSP4, JUN, CREB1,
MEF2C
2.70E-02 Crk binds to the active PDGF receptor PDGFRB, CRK
2.70E-02 LIM kinase phosphorylation by ROCK ROCK1, ROCK2
2.77E-02 CREB phosphorylation through the activation of CaMKII NEFL, GRIN1, CREB1
2.78E-02 Cell Cycle, Mitotic BUB1B, RFC2, CEP250,
AURKA, CDKN2A, ANAPC2,
ORC5L, CENPF, TYMS,
MCM4, PSMD14,CKS1B,
DNA2, GMNN, CCNE2,
CDC25C, CDC6, ODF2,
CDC25A, ERCC6L, GORASP1
3.15E-02 E2F mediated regulation of DNA replication CDC25A, ORC5L, CDC6,
TYMS
3.67E-02 Interaction of MyoD-E protein with MEF2 MYOD1, MEF2C