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. Author manuscript; available in PMC: 2012 Aug 28.
Published in final edited form as: Bioorg Med Chem Lett. 2006 Dec 9;17(5):1280–1283. doi: 10.1016/j.bmcl.2006.12.016

graphic file with name ukmss-27229-t0005.jpg

No.a Structureb TR IC50
(μM)c
GR IC50
(μM)c
Selectivity
for TRe
T. brucei
EC50 (μM)f

R1 R2 R3
5a NMe2.HCl - - 2.9 (±1.4) 20.4 (±6.3) 7 0.55 (±0.04)
5b N-piperidyl - - 7.8 (±3.7) 105 (±36) 13 0.95 (±0.09)
6a NMe2.HCl - - 0.34 (±0.13) 20.3 (±8.4) 59 0.68 (±0.10)
6b NH-4-(CO2-nBu)Ph - - 2.4 (±0.92) > 135d >56 0.96 (±0.11)
6c NHPh - - 1.7 (±0.78) 58.0 (±16) 35 1.01 (±0.07)
6d NH-2,3-diMePh - - 1.5 (±0.71) 86.3 (±41) 58 5.87, 0.68, 0.15g
6e NH-3-FPh - - 3.3 (±1.1) > 173 >52 0.82 (±0.16)
7a tBu N((CH2)2OH).HCl - 2.0 (±0.21) 24.9 (±6.0) 13 3.01 (±0.30)
7b iPr NMe2 - 11.8 (±3.2) 79.3 (±25) 6.7 > 50
7c tBu N-homopiperidyl - 38.8 (±5.0) > 155 >4 3.30 (±0.30)
8a Cl Cl R3 = NMe2.HCl 3.3 (±2.2) 64.8 (±18) 20 1.00 (±0.21)
8b Cl H R3 = N-morpholinyl 148 (±31) > 212 >1.4 0.98 (±0.07)
8c Cl Cl R3 = NH-4-EtPh 107 (±0.71) > 157 >1.5 1.65 (±0.18)
a

All compounds were purchased from ChemBridge, except for 5a and 5b (Peakdale).

b

Dash signifies that this chemotype did not possess variable groups at this position.

c

Values are means of two experiments, standard deviation is given in parentheses.

d

IC50 value greater than the highest tested inhibitor concentration.

e

GR IC50/TR IC50.

f

Values are weighted means of three independent experiments, standard errors are given in parentheses. IC50 values for pentamidine are 4.6 (± 0.2) nM.

g

Compound 6d gave highly variable EC50 results, all three are listed.