Table 1.
List of the species used in the analysis.
| Species | Whole genome |
EST |
Mitochondrial genome |
|||||
|---|---|---|---|---|---|---|---|---|
| Contigs | Nucleotides | Accession numbers | Reads | Nucleotides | Contigs | Nucleotides | Accession numbers | |
| Arabidopsis lyrata | 695 | 206667935 | GL348713–GL349407 | |||||
| Arabidopsis thaliana | 5 | 119145879 |
NC_003070–NC_003071, NC_003074–NC_003076 |
1529700 | 400512451 | 1 | 366924 | NC_001284 |
| Brassica rapa | 51658 | 273071614 | AENI01000001–AENI01051658 | 213605 | 122970377 | 1 | 219747 | NC_016125 |
| Capsella rubella | 853 | 134834574 | ||||||
| Carica papaya | 3207 | 331271729 | DS981520–DS984726 | 77393 | 54789864 | |||
| Citrus clementina | 1128 | 295550349 | ||||||
| Citrus sinensis | 12574 | 319231331 | ||||||
| Eucalyptus camaldulensis | 274001 | 654922307 | DF097775–DF126446 | |||||
| Eucalyptus grandis | 4952 | 691297852 | ||||||
| Eutrema halophilum | 639 | 243117811 | 38022 | 20080214 | ||||
| Eutrema parvulum | 7 | 114396853 | CM001187–CM001193 | |||||
| Gossypium raimondii | 1448 | 763818933 | ||||||
| Theobroma cacao | 1782 | 351351221 | FR720657–FR725448 | |||||
| Vitis vinifera | 33 | 486265422 | FN597015–FN597047 | 446643 | 284204927 | 1 | 773279 | NC_012119 |
| Brassica napus | 643437 | 381399492 | 1 | 221853 | NC_008285 | |||
| Brassica oleracea | 179150 | 125257248 | 1 | 360271 | NC_016118 | |||
| Limnanthes alba | 15331 | 8582959 | ||||||
| Raphanus raphanistrum | 164119 | 104536170 | ||||||
| Raphanus sativus | 150680 | 97973638 | ||||||
| Tropaeolum majus | 10507 | 6436290 | ||||||
| Brassica carinata | 1 | 232241 | NC_016120 | |||||
| Brassica juncea | 1 | 219766 | NC_016123 | |||||
| Lotus japonicus | 1 | 380861 | NC_016743 | |||||
| Millettia pinnata | 1 | 425718 | NC_016742 | |||||
| Ricinus communis | 1 | 502773 | NC_015141 | |||||
The number of contigs/reads and the number of nucleotides for the whole genome, EST, and mitochondrial genome data files are given. In addition, for whole genome and mitochondrial genome data the NCBI accession numbers are given if available.