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. 2012 Aug 30;7(8):e43872. doi: 10.1371/journal.pone.0043872

Table 1. Binding energy calculated based on implicit GBSA model.

Cluster a Gbinding b EGB Evdw Eele Population c (%)
COH system
0–1 −83.48±74.10 99.68 1.30 −184.46 35.5
0–2 −158.50±56.79 170.27 3.93 −332.70 3.3
1–0 −193.40±77.09 250.30 1.23 −444.93 7.8
1–1 −237.54±65.33 274.47 2.39 −514.40 16.7
1–2 −327.63±28.01 351.76 3.98 −683.37 0.4
2–0 −259.10±77.63 303.92 3.28 −566.30 9.6
2–1 −335.51±82.06 355.49 4.35 −695.35 13.4
MG system
0–1 −33.44±29.78 40.86 0.67 −74.97 29.0
0–2 −68.15±49.95 165.29 −0.93 −232.51 0.5
1–0 −84.23±35.83 194.63 −3.11 −275.75 36.4
1–1 −127.13±36.39 263.33 −2.18 −388.28 11.4
1–2 −160.61±29.81 311.09 −4.30 −467.40 0.1
2–0 −108.07±38.07 236.18 −1.73 −342.52 15.2
2–1 −157.20±33.99 305.04 −0.71 −461.53 4.4
a

Cluster x – y means the number of E316 residues which were located less than 0.5 nm from ions is x, and the number of E320 residues which were located less than 0.5 nm from ions is y.

b

the unit for energy terms is kJ/mol.

c

Population is the percentage of a cluster in the population where at least 1 E316 or E320 was located less than 0.5 nm from ions.