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. 2012 Aug 31;7(8):e44123. doi: 10.1371/journal.pone.0044123

Table 1. Trapped endogenous genes from G418-resistant HeLa cells.

Junction sequences Gene name Accession number Chromosomename Exon number Insertion sites
gtgtctctcctatcTA cagttgaag IPNN5B NM_005540.2 Chr:1 18 intron1
ttggattttatacaTA cagttgaag APAF1 NG_029094.1 Chr:12 27 intron16
aaactctttacataTA cagttgaag HERC2 NM_004667.4 Chr:15 93 intron66
ccctttttgttaacTA cagttgaag MPP2 NM_005374.3 Chr:17 13 intron3
tctctttcacaaacTA cagttgaag TRIO NT_006576.16 Chr:5 57 intron2
tgacagaacatagaTA cagttgaag C4orf32 NM_152400.2 Chr: 4 2 intron1
atacatcttatagtTA cagttgaag ABCB11 NG_007374.1 Chr: 2 15 intron5
gcacccactgtacaTA cagttgaag CPZ NM_001014447.2 Chr:4 11 intron3
tccaacaccacatcTA cagttgaag CACNA1E NM_001205293.1 Chr:1 48 intron6
agaatattctgcatTA cagttgaag RP11-553P9.3 NT_016354.19 Chr:4 5′UTR
gttccttcccaaccTA cagttgaag GRXCR1 NG_027718.1 Chr:4 4 intron1
tagcattggggagcTA cagttgaag U6snRNA NW_001838848.1 Chr: 2 N/A N/A
tttataatgacttaTA cagttgaag TMEM26 NM_178505.6 Chr:10 7 intron1
tgaggggaaaaataTA cagttgaag TPST2 NM_001008566.1 Chr:22 7 exon7
tactatcttgttacTA cagttgaag IMMT NM_006839.2 Chr:2 15 intron3
tctaagaattcaccTA cagttgaag RPL2I NT_024524.14 Chr:13 6 intron1
ttcagctgagtacaTA cagttgaag Unknown AL139023.6 Chr:14 N/A N/A
taaaatcaatcttaTA cagttgaag DENNEB NM_144977.4 Chr: 1 20 intron17

Junction sequences were obtained by the splinkerette PCR. Partial trap cassette sequences in italic were shown on the right of TA and partial genome sequences in regular on the left of TA.