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. Author manuscript; available in PMC: 2013 Aug 15.
Published in final edited form as: Int J Cancer. 2011 Nov 28;131(4):803–812. doi: 10.1002/ijc.26436

Table 3.

Odds Ratios and 95% Confidence Intervals for estimated Haplotypes of the ABCG2 and NR1I2 genes associated with B-NHL and subtypes.

B-NHL DLBCL FL CLL




Gene Structure Freq. OR* 95% CI p OR 95% CI p OR 95% CI p OR 95% CI p
ABCG2 Block2

A-A-g-C-a 0.36 Reference Reference Reference Reference
g-A-A-C-G 0.28 0.95 (0.82–1.10) 0.5 0.99 (0.80–1.21) 0.9 0.93 (0.70–1.22) 0.6 0.89 (0.71–1.11) 0.3
A-A-A-C-G 0.25 0.78 (0.67–0.91) 0.001 0.80 (0.64–0.99) 0.04 0.79 (0.60–1.05) 0.10 0.74 (0.59–0.94) 0.01
A-g-A-a-G 0.09 0.70 (0.56–0.87) 0.002 0.70 (0.51–0.96) 0.03 0.86 (0.58–1.28) 0.5 0.53 (0.37–0.77) 0.001

NR1I2 Block2

G-A-A-G 0.60 Reference Reference Reference Reference
a-g-g-G 0.19 1.22 (1.05–1.43) 0.009 1.26 (1.03–1.55) 0.03 1.39 (1.06–1.83) 0.02 1.13 (0.90–1.43) 0.3
G-g-A-a 0.13 1.09 (0.90–1.30) 0.4 0.90 (0.69–1.18) 0.4 1.28 (0.92–1.77) 0.1 1.20 (0.91–1.57) 0.2
G-g-g-G 0.08 0.82 (0.66–1.01) 0.07 0.83 (0.62–1.13) 0.2 0.56 (0.34–0.91) 0.02 0.97 (0.70–1.33) 0.8

Abbreviations are explained in Table 2.

*

Odds Ratios were adjusted for the matching variables: age (continuous), sex and study center (categorical); the common haplotype was used as reference group.

SNP order: rs13120400-rs1481012-rs2725256-rs2231142-rs1564481. Uppercase letters indicate major allele, lowercase letters denote minor allele

SNP order: rs11917714-rs6785049-rs3732360-rs1054190. Uppercase letters indicate major allele, lowercase letters denote minor allele