Table 1. Distribution of candidate tRNase Zs from representative metazoans.
Species | Protein name | Form | Accession number | Database | No. aa# | EST |
Deuterostomes | ||||||
Branchiostoma floridae | BflTRZ1 | tRNase ZS | XP_002598072.1 | NCBI | 367* | + |
Branchiostoma floridae | BflTRZ2 | tRNase ZL | XP_002603583.1 | NCBI | 785* | |
Canis familiaris | CfaTRZ1 | tRNase ZS | XP_849493.1 | NCBI | 374 | + |
Canis familiaris | CfaTRZ2 | tRNase ZL | XP_546630.2 | NCBI | 821 | + |
Ciona intestinalis | CinTRZ1 | tRNase ZS | 299192 | Metazome | 383 | + |
Ciona intestinalis | CinTRZ2 | tRNase ZL | 295609 | Metazome | 727 | + |
Danio rerio | DreTRZ1 | tRNase ZS | NP_001003503.1 | NCBI | 372 | + |
Danio rerio | DreTRZ2 | tRNase ZL | XP_003198113.1 | NCBI | 895 | + |
Homo sapiens | HsaTRZ1 | tRNase ZS | NP_061166.1 | NCBI | 363 | + |
Homo sapiens | HsaTRZ2 | tRNase ZL | NP_060597.4 | NCBI | 826 | + |
Loxodonta africana | LafTRZ1 | tRNase ZS | ENSLAFP00000001283 | Ensembl | 364 | |
Loxodonta africana | LafTRZ2 | tRNase ZL | ENSLAFP00000025345 | Ensembl | 819 | |
Mus musculus | MmuTRZ1 | tRNase ZS | NP_444485.2 | NCBI | 362 | + |
Mus musculus | MmuTRZ2 | tRNase ZL | CAI24609 | NCBI | 824 | + |
Salmo salar | SsaTRZ1 | tRNase ZS | NCBI | 370 | + | |
Salmo salar | SsaTRZ2 | tRNase ZL | C0H8T6 | Uniprot | 875 | + |
Strongylocentrotus purpuratus | SpuTRZ1 | tRNase ZS | XP_001189573.1 | NCBI | 362 | |
Strongylocentrotus purpuratus | SpuTRZ2 | tRNase ZL | XP_783904.2 | NCBI | 931* | + |
Xenopus tropicalis | XtrTRZ1 | tRNase ZS | 476074 | Metazome | 363 | + |
Xenopus tropicalis | XtrTRZ2 | tRNase ZL | 157533 | Metazome | 835* | + |
Protostomes | ||||||
Bombyx mori | BmoTRZ1 | tRNase ZL | Bmb008309 | Metazome | 889* | + |
Caenorhabditis elegans | CelTRZ1 | tRNase ZL | NP_001023109.1 | NCBI | 833 | + |
Capitella teleta | CteTRZ1 | tRNase ZL | 228344 | JGI | 758 | + |
Capitella teleta | CteTRZ2 | tRNase ZL-Like | 218896 | JGI | 738 | + |
Drosophila melanogaster | DmeTRZ1 | tRNase ZL | NP_724916.1 | NCBI | 766 | + |
Lottia gigantea | LgiTRZ1 | tRNase ZS | 218281 | JGI | 356 | + |
Lottia gigantea | LgiTRZ2 | tRNase ZL | 156489 | JGI | 738* | + |
Lottia gigantea | LgiTRZ3 | tRNase ZL | 230203 | JGI | 780 | + |
Tribolium castaneum | TcaTRZ1 | tRNase ZL | XP_968692.2 | NCBI | 827 | + |
Basal Metazoans | ||||||
Amphimedon queenslandica | AquTZ1 | tRNase ZS | Aqu1.217211 | JGI | 373* | |
Amphimedon queenslandica | AquTZ2 | tRNase ZL | XP_003385508.1 | NCBI | 712* | |
Hydra magnipapillata | HmaTRZ1 | tRNase ZS | Hma2.228140 | JGI | 359 | + |
Hydra magnipapillata | HmaTRZ2 | tRNase ZL | Hma2.206546 | JGI | 723* | |
Nematostella vectensis | NveTRZ1 | tRNase ZS | 186754 | JGI | 342 | + |
Nematostella vectensis | NveTRZ2 | tRNase ZL | 11980 | JGI | 827* | |
Nematostella vectensis | NveTRZ3 | tRNase ZL | 108544 | JGI | 769* | + |
Trichoplax adhaerens | TadTRZ1 | tRNase ZL | B3RMG1 | Uniprot | 728* | |
Protozoans | ||||||
Monosiga brevicollis | MbrTRZ1 | tRNase ZS | 25108 | JGI | 380* | |
Monosiga brevicollis | MbrTRZ2 | tRNase ZL | 23750 | JGI | 812* |
The number of amino acids in metazoan tRNase Z proteins.
Indicates that mispredicted sequences obtained from the databases have been corrected.
A plus sign indicates that gene expression is confirmed by the presence of ESTs.