Table 1.
Gene clusters using the Ptgs2, C1qB and Lgals3 anchors (bolded), with a correlation of at least 0.99.
| Common Name | Genebank Number | Description |
|---|---|---|
| Ptgs2 | M94967 | prostaglandin-endoperoxide synthase 2 |
| Il1b | BC011437 | interleukin 1 beta |
| Cxcl2 | NM_009140 | chemokine (C-X-C motif) ligand 2 |
| Cxcl1 | NM_008176 | chemokine (C-X-C motif) ligand 1 |
| EGR1 | NM_007913 | Early growth response 1 |
| C1qb | NM_009777 | complement component 1, q subcomponent, beta polypeptide |
| Laptm5 | BB264849 | lysosomal-associated protein transmembrane 5 |
| Slamf9 | NM_029612 | SLAM family member 9 |
| C1qg | NM_007574 | complement component 1, q subcomponent, gamma polypeptide |
| Ctsh | NM_007801 | cathepsin H |
| Ppgb | NM_008906 | protective protein for beta-galactosidase |
| C1qa | NM_007572 | complement component 1, q subcomponent, alpha polypeptide |
| Igsf7 | AF251705 | immunoglobulin superfamily, member 7 |
| Lair1 | AK017222 | DNA segment, Chr 7, Brigham & Women’s Genetics 0421 expressed |
| Hexb | NM_010422 | hexosaminidase B |
| Itgb5 | NM_010580 | integrin beta 5 |
| Ctsz | NM_022325 | |
| Gns | BB445684 | glucosamine (N-acetyl)-6-sulfatase |
| Unc93b | BC018388 | unc-93 homolog B (C. elegans) |
| Abca1 | BB144704 | ATP-binding cassette, sub-family A (ABC1), member 1 |
| Mpeg1 | L20315 | macrophage expressed gene 1 |
| Tyrobp | NM_011662 | TYRO protein tyrosine kinase binding protein |
| Creg | BC027426 | cellular repressor of E1A-stimulated genes |
| Ctsd | NM_009983 | cathepsin D |
| Naglu | NM_013792 | alpha-N-acetyl glucosaminidase (Sanfilippodisease IIIB) |
| Grn | M86736 | Granulin |
| Lyn | M64608 | Yamaguchi sarcoma viral (v-yes-1) oncogenehomolog |
| Pik3ap1 | BI684288 | phosphoinositide-3-kinase adaptor protein 1 |
| C3ar1 | NM_009779 | complement component 3a receptor 1 |
| Fcgr2b | M14216 | Fc receptor, IgG, low affinity IIb |
| Clecsf5 | NM_021364 | C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 5 |
| Lcp2 | BC006948 | lymphocyte cytosolic protein 2 |
| Lgals3 | X16834 | lectin, galactose binding, soluble 3 |
| Fer1l3 | BI555209 | fer-1-like 3, myoferlin (C. elegans) |
| Rgs19 | BC003838 | regulator of G-protein signaling 19 |
| Sh3glb1 | AV005520 | SH3-domain GRB2-like B1 (endophilin) |
| Cln5 | AV315220 | ceroid-lipofuscinosis, neuronal 5 |
| Lcp1 | NM_008879 | lymphocyte cytosolic protein 1 |
| Gnpda1 | NM_011937 | glucosamine-6-phosphate deaminase 1 |
| Syngr2 | BC004829 | synaptogyrin 2 |
| Asc | BG084230 | apoptosis-associated speck-like protein containing a CARD |
| P2ry6 | BC027331 | Pyrimidinergic receptor P2Y, G-protein coupled, 6 |
| Gcnt1 | AK017462 | glucosaminyl (N-acetyl) transferase 1, core 2 |
| Capg | NM_007599 | capping protein (actin filament), gelsolin-like |
| Ly96 | NM_016923 | lymphocyte antigen 96 |
| Fes | BG867327 | feline sarcoma oncogene |
| B4galt1 | NM_022305 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 |
| Cyba | AK018713 | cytochrome b-245, alpha polypeptide |
| Il10rb | NM_008349 | interleukin 10 receptor, beta |
| Fcer1g | NM_010185 | Fc receptor, IgE, high affinity I, gamma polypeptide |
| Pscd4 | AK010908 | pleckstrin homology, Sec7 and coiled/coil domains 4 |
| Mafb | AW412521 | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) |
| Apobec1 | BC003792 | Apolipoprotein B editing complex 1 |
| Cd68 | BC021637 | CD68 antigen |
| Ifi203 | AI607873 | interferon-activatable protein |
| Gngt2 | AK010554 | guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 |
| Apbb1ip | BC023110 | amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein |
| Kdt1 | U13371 | kidney cell line derived transcript 1 |
| Myo1f | AK021181 | myosin IF |
| Slc11a1 | NM_013612 | solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 |
| Lyzs | AW208566 | Lysozyme |
| Tcirg1 | NM_016921 | T-cell, immune regulator 1 |
| Cd53 | NM_007651 | CD53 antigen |
| Slc7a7 | NM_011405 | solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 |
| Hcph | NM_013545 | hemopoietic cell phosphatase |
| Inpp5d | U39203 | inositol polyphosphate-5-phosphatase D |
| Anxa4 | NM_013471 | annexin A4 |
| Guca1a | NM_008189 | guanylatecyclase activator 1a (retina) |
| Cklfsf3 | NM_024217 | chemokine-like factor super family 3 |
| Tgfbr2 | BG793483 | transforming growth factor, beta receptor II |
| Igsf6 | NM_030691 | immunoglobulin superfamily, member 6 |