Skip to main content
. 2012 Sep 5;103(5):1028–1036. doi: 10.1016/j.bpj.2012.08.012

Table 1.

Table of simulations for ssDNA parameter validation

Force field No. simulations Salt concentrations (M) Simulation lengths (ns)
CHARMM27 15 0, 0.1, 0.2, 0.5, 1 100
AMBER99 15 0, 0.1, 0.2, 0.5, 1 100
AMBER99 with ParmBSC0 torsions 15 0, 0.1, 0.2, 0.5, 1 100
GROMOS96 53A6 15 0, 0.1, 0.2, 0.5, 1 100
CHARMM27 (extended ssDNA) 3 1 100
AMBER99 (extended ssDNA) 3 1 100
AMBER99 with ParmBSC0 torsions (extended ssDNA) 3 1 100
GROMOS96 53A6 (extended ssDNA) 3 1 100