Table II. List of proteins identified as differentially regulated during zebrafish caudal fin regeneration based on DIGE analysis.
This table provides the list of 90 proteins identified as differentially regulated proteins for caudal fin regeneration based on DIGE analysis. The proteins are listed along with the S numbers, accession numbers, Uniprot ID, fold changes, up- or down-regulation, Time points, coverage, PSMs, peptides, molecular mass, calculated (Calc.) pI, score, gene symbol, description, detection method, and peptide sequences identified based on proteomics study.
| S No. | Accession number | Uniprot ID | DIGE ID | Fold Change | U/D regulation | Time points | Coverage | No. PSMs | No. Peptides | Molecular mass (kDa) | Calc. pI | Score | Gene Symbol | Description | Detection method | Sequences |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | gI-32442452 | Q7SYH6 | D18 | -2.53 | D | 0/1 | 36 | NA | 14 | 51.849 | 5.86 | 102 | Pah | Pah | MALDI MS/MSMS | VLDEIVDGLR; TQIRGQVHELSR; QKDTVPWFPNDIQDLDR; DTVPWFPNDIQDLDR; FANQILSYGSELDADHPGFTDTVYR; EFADIAYNYR; ATWGTVFR; TLYPTHACR; EDNIPQLEDISHYLQSCTGFR; LRPVAGLLSSR; DFLAGLAFR; VFHSTQYIR; YNAYTQR; NLADSINGEISILCNALR |
| 2 | gI-18858329 | B3DG37 | D12 | -2.35 | D | 0/1 | 58 | NA | 7 | 16.606 | 7.7 | 62 | BA1 | bal globin | MALDI MS/MSMS | VEWTDAER; LNIDEIGPQALSR; CLIVYPWTQR; YFATFGNLSSPAAIMGNPK Oxidation (M); LHVDPDNFR; FGQAGFNADVQEAWQK; FLAVVVSALCR |
| 3 | gI-32442452 | Q7SYH6 | D16 | -2.11 | D | 0/1 | 27 | NA | 11 | 51.849 | 5.86 | 67 | Pah | Pah | MALDI MS/MSMS | VLDEIVDGLR; TQIRGQVHELSR; DTVPWFPNDIQDLDR; EFADIAYNYR; ATWGTVFR; TLYPTHACR; EHNRVFPLLEK; LRPVAGLLSSR; DFLAGLAFR; VFHSTQYIR; NLADSINGEISILCNALR |
| 4 | gI-189514813 | NA | D9 | -2.08 | D | 0/1 | 19 | NA | 14 | 109.563 | 8.97 | 55 | RIM1 | Predicted: similar to regulating synaptic membrane exocytosis protein 1 (Rab3 interacting molecule) | MALDI MS/MSMS | SQVPGANDTLLPNAGPGDHPKGADTMPASR Oxidation (M); SEPPREK; RPVSMHEQNGKVIGR; YPVKPQK; EEQEMRMHAK 2 Oxidation (M); MHAKVSK; EKAAEIMR; DSSLSSDQSESLRPPPPR; STMPREAGSLLGLK Oxidation (M); AGDEVLQWNGKALPGATK; MDRPSISVMSPTSPGMLR 2 Oxidation (M); MDRPSISVMSPTSPGMLRDLPLVLPGQLSVK Oxidation (M); ELPPRPDGRPRNPYVK; SRPAHIPMQR Oxidation (M) |
| 5 | gI-18858329 | Q90486 | D3 | -2.07 | D | 0/1 | 64 | NA | 9 | 16.606 | 7.7 | 75 | ba1 | bal globin | MALDI MS/MSMS | VEWTDAER; TAILGLWGK; LNIDEIGPQALSR; CLIVYPWTQR; YFATFGNLSSPAAIMGNPK; YFATFGNLSSPAAIMGNPK Oxidation (M); LHVDPDNFR; FGQAGFNADVQEAWQK; FLAVVVSALCR |
| 6 | gI-208019381 | B5WY15 | D21 | -1.83 | D | 0/1 | 18 | NA | 11 | 57.677 | 6.65 | 55 | ftr65 | finTRIM family protein | MALDI MS/MSMS | HHDTVSAAAER; HHDTVSAAAERTELESR; TELESRLR; ETQSRFQQR; SELTQMIR Oxidation (M); TAVSGAEER; LQQFCTEEMK Oxidation (M); SYWELEWSGAR; VFLSVSYK; GRGNECLFGR; VKLCDLTV |
| 7 | gI-55962880 | Q5SPF0 | D7 | -1.72 | D | 0/1 | 41 | NA | 8 | 28.89 | 6.36 | 61 | si:ch211–171o19.1 | Novel protein similar to vertebrate pim oncogene family | MALDI MS/MSMS | DEDTHIIEINSQHYKIGAELGK; QIAELLDWKVEAER; VEAERYIIVVER; LIPSMNLREFLIDNK Oxidation (M); EDTPEDLVRK; IMFNVTIAAHTCCQR Oxidation (M); IMFNVTIAAHTCCQRGVFHSDIK; LIDFGCSVLLTK |
| 8 | gI-189522994 | NA | D10 | -1.62 | D | 0/1 | 21 | NA | 13 | 87.212 | 9.71 | 57 | LOC569862 | Predicted: similar to cytoskeleton associated protein 2-like | MALDI MS/MSMS | TLSGVDENTSLK; AQPASHVANKSQK; IQSHNPVTNR; INQKPNSATNRSDVYQR; QHATLKASNAAASTK; SCVLPQTTSEHKELQQPVMR Oxidation (M); ELQQPVMR Oxidation (M); SNHTKPTVQFQTPK; SNHTKPTVQFQTPKSSICPSSTQGVR; KLQEWR; DVMSRVPMAQK Oxidation (M); SQQGAEPGQVDGHEIR; DDSQPQSSPLYVYRENEALR |
| 9 | gI-51230599 | rQ6AZV8 | D8 | −1.61 | D | 0/1 | 40 | NA | 11 | 44.853 | 5.84 | 67 | 4HPPD | 4-Hydroxyphenylpyruvate dioxygenase | MALDI MS/MSMS | FICFDHITFWVGNAK; LGFEPLAYR; IIYVFTSALNPGNK; DVAFTVENCDFLVEK; MAVVQTYGDTTHTFVER; LDFIDHVVGNQPDSEMVPIVEWYQR; LDFIDHVVGNQPDSEMVPIVEWYQR Oxidation (M); QLQTEYSALR; SQIQEYVEYYGGAGVQHIAMNTSDIISAIR; HNHQGFGAGNFK; SLFEAIEADQNAR |
| 10 | gI-39645428 | Q6P3L3 | D27 | −1.6 | D | 0/1 | 33 | NA | 21 | 72.117 | 5.04 | 130 | hsp5 | Heat shock protein 5 | MALDI MS/MSMS | VEIIANDQGNR; ITPSYVAFTTEGER; KVTHAVVTVPAYFNDAQR; VTHAVVTVPAYFNDAQR; QATKDAGTIAGLNVMR; IINEPTAAAIAYGLDKR; VMEHFIK; VMEHFIK Oxidation (M); VMEHFIKLYK; IEIESFFEGEDFSETLTR; AKFEELNMDLFR; AKFEELNMDLFR Oxidation (M); FEELNMDLFR; FEELNMDLFR Oxidation (M); VLEDSDLKKPDIDEIVLVGGSTR; KPDIDEIVLVGGSTR; VYEGERPLTK; DNHLLGTFDLTGIPPAPR; GVPQIEVTFEIDVNGILR; LTPEDIERMVNEAER; IEWLEAHQDADLEEFQAK |
| 11 | gI-32442452 | Q7SYH6 | D17 | -1.58 | D | 0/1 | 36 | NA | 13 | 51.849 | 5.86 | 91 | Pah | Pah | MALDI MS/MSMS | VLDEIVDGLR; TQIRGQVHELSR; DTVPWFPNDIQDLDR; FANQILSYGSELDADHPGFTDTVYR; EFADIAYNYR; ATWGTVFR; TLYPTHACR; EDNIPQLEDISHYLQSCTGFR; LRPVAGLLSSR; DFLAGLAFR; VFHSTQYIR; YNAYTQR; NLADSINGEISILCNALR |
| 12 | gI-125851812 | NA | D19 | −1.56 | D | 0/1 | 33 | NA | 13 | 59.925 | 6.39 | 79 | wu:fj78b06 | Predicted: wu:fj78b06 | MALDI MS/MSMS | SEVFGQLR; DGLLPEQTYFVGFAR; LAAFFSR; YVEESSFSDLNTHLLSLPGGAEANR; VIVEKPFGR; DLQSSEELSSHLSSLFTEEQIYR; IFGPIWNR; EPFGTQGR; GGYFDDFGIIR; WDGVPFILR; LQFTDVPGDIFSSQCR; KPGVYFSPEETELDLTYHSR; LILDVFCGSQMHFVR Oxidation (M) |
| 13 | gI-112180551 | Q6PHG2 | D22 | −1.53 | D | 0/1 | 38 | NA | 12 | 51.621 | 6.14 | 83 | Hpx | Hpx protein | MALDI MS/MSMS | GKPGGEGHKHELHHGAQLDR; HELHHGAQLDR; TFPELDDHHHLGHVDAAFR; GDEIYHFNMHTK; YMGHYYCFHGHQFSK; CPHFGSK; VHLDAITSDDAGNIYAFR; FHSDTIESEFK; ELHSEVDSVFSYDGHFYMIK; VGKPHTHLEGYPKPLK; DVLGIEGPVDAAFVCEDHHVVHIIK; IMPEQQK |
| 14 | gI-189514909 | NA | D6 | −1.52 | D | 0/1 | 43 | NA | 9 | 39.302 | 5.34 | 58 | LOC796672 | Predicted: similar to gap-protease | MALDI MS/MSMS | DPASASQISEFLTASNARIDR; SVKPCLPQPTCYAGEPHLCRSFLSK; VAFVITLLSGRAAQWGTTAWEK; SMADYSIEFR Oxidation (M); TLAAESGWNAEAQWDMFLHGLSDR; TLAAESGWNAEAQWDMFLHGLSDR Oxidation (M); LQDEIYSLDLPK; FLDPVPDSPVSPMAPEVGSVDPEPMQLGRSR 2 Oxidation (M); SRLSVEEK |
| 15 | gI-37595424 | Q6NWJ5 | U20 | 1.55 | U | 0/1 | 33 | NA | 13 | 50.687 | 4.93 | 77 | zTUBA6 | Tubulin α6 | MALDI MS/MSMS | AVFVDLEPTVIDEVR; QLFHPEQLITGK; EIIDLVLDR; NLDIERPTYTNLNR; LIGQIVSSITASLR; FDGALNVDLTEFQTNLVPYPR; YMACCLLYR; SIQFVDWCPTGFK; AVCMLSNTTAIAEAWAR; AVCMLSNTTAIAEAWAR Oxidation (M); AFVHWYVGEGMEEGEFSEAR; AFVHWYVGEGMEEGEFSEAR Oxidation (M); EDMAALEK |
| 16 | gI-18858425 | Q9PUB5 | U20 | 1.55 | U | 0/1 | 39 | NA | 29 | 58.551 | 5.34 | 218 | krt5 | Keratin 5 | MALDI MS/MSMS | NFSSMSTSAVPMGSR; FASFIDK; FLEQQNK; WSLLQEQTTTR; SNIDAMFEAYIANLR; SNIDAMFEAYIANLR Oxidation (M); SNIDAMFEAYIANLRR; NMQNLVEDFK; YEDEINKR; AAVENEFVLLK; VDSLQDEINFLR; AIFEEELR; AIFEEELRELQSQIK; DTSVVVEMDNSR; NLDMDAIVAEVR; NLDMDAIVAEVR Oxidation (M); AQYEDIANR; SRAEAESWYK; AEAESWYK; AEIADLNR; ANLEAQIAEAEER; ANLEAQIAEAEERGELAVK; IRDLEDALQR; DLEDALQR; EYQELMNVK; LALDIEIATYR; LALDIEIATYRK; KLLEGEESR; LLEGEESR |
| 17 | gI-55925273 | Q5U3E4 | U14 | 1.83 | U | 0/1 | 30 | NA | 9 | 37.009 | 5.54 | 60 | SGT1 | SGT1, suppressor of G2 allele of SKP1 | MALDI MS/MSMS | YSDSFIDEDPRR; ADNAEWLCQR; AYAYILLKEYTK; AQDLQPGLALPFLR; EGVIVSFGER; KTEAIQWEK; HFTASQYPSSSHYTR; LFQQIYSDGSDDVR; LFQQIYSDGSDDVRR |
| 18 | gI-62298523 | Q7ZVI7 | U15 | 11.66 | U | 0/1 | 33 | NA | 10 | 42.082 | 5.3 | 70 | actba | RecName: Full = actin, cytoplasmic 1; AltName: Full = β-actin-1; contains; RecName: Full = Actin, cyto | MALDI MS/MSMS | AVFPSIVGRPR; AVFPSIVGRPRHQGVMVGMGQK Oxidation (M); IWHHTFYNELR; VAPEEHPVLLTEAPLNPK; GYSFTTTAER; SYELPDGQVITIGNER; DLYANTVLSGGTTMYPGIADR Oxidation (M); EITSLAPSTMK Oxidation (M); EITSLAPSTMKIK Oxidation (M); QEYDESGPSIVHR |
| 19 | gI-94732413 | Q1LXJ0 | U19 | 12.68 | U | 0/1 | 28 | NA | 12 | 49.661 | 5.31 | 56 | zgc:92533 | Novel protein similar to type I cytokeratin, enveloping layer | MALDI MS/MSMS | VSGMYAGSVHGGAGGYGTR; VSGMYAGSVHGGAGGYGTR Oxidation (M); DYSAYYATISDLQNK; LAADDFR; QSVEADIAGLR; NHEEELLAAR; GQMSGQVHVEVDAAPQEDLTK; GQMSGQVHVEVDAAPQEDLTK Oxidation (M); DLEHWFQSK; TLQGLEIELQSQLSMK Oxidation (M); ASLEGTLADTQAR; TRLEMEIAEYR Oxidation (M) |
| 20 | gI-18858425 | Q9PUB5 | U23 | 12.68 | U | 0/1 | 30 | NA | 20 | 58.551 | 5.34 | 103 | krt5 | Keratin 5 | MALDI MS/MSMS | WSLLQEQTTTR; SNIDAMFEAYIANLR; SNIDAMFEAYIANLR Oxidation (M); QLDGLGNEKMK; MKLEGELK; MKLEGELK Oxidation (M); VDSLQDEINFLR; AIFEEELR; AIFEEELRELQSQIK; NLDMDAIVAEVR; NLDMDAIVAEVR Oxidation (M); AQYEDIANR; SRAEAESWYK; QKFEEMQSSAGK Oxidation (M); AEIADLNR; ANLEAQIAEAEER; ANLEAQIAEAEERGELAVK; IRDLEDALQR; LALDIEIATYR; SSIVSSQKR |
| 21 | gI-94732413 | Q1LXJ0 | U17 | 1.64, 2.39 | U | 0/1 | 25 | NA | 12 | 49.661 | 5.31 | 67 | zgc:92533 | Novel protein similar to type I cytokeratin, enveloping layer | MALDI MS/MSMS | ATMQNLNDR Oxidation (M); IRQFLDSK; LAADDFR; VKYENELSMR Oxidation (M); QSVEADIAGLR; KNHEEELLAAR; NHEEELLAAR; GQMSGQVHVEVDAAPQEDLTK; DLEHWFQSK; SEITELKR; ASLEGTLADTQAR; TRLEMEIAEYR Oxidation (M) |
| 22 | gI-94732413 | Q1LXJ0 | U21 | 1.68,4.87 | U | 0/1 | 46 | NA | 29 | 49.661 | 5.31 | 175 | zgc:92533 | Novel protein similar to type I cytokeratin, enveloping layer | MALDI MS/MSMS | MSSYSRSSFK; FSMSGSGGGGGR; FSMSGSGGGGGR Oxidation (M); VSGMYAGSVHGGAGGYGTR; VSGMYAGSVHGGAGGYGTR Oxidation (M); DYSAYYATISDLQNK; LAADDFR; VKYENELSMR; VKYENELSMR Oxidation (M); QSVEADIAGLR; QSVEADIAGLRK; VLDELTMTR; VLDELTMTR Oxidation (M); SDLEMQIEGLKEELIFLK Oxidation (M); NHEEELLAAR; GQMSGQVHVEVDAAPQEDLTK; GQMSGQVHVEVDAAPQEDLTK Oxidation (M); DLEHWFQSK; SEITELKR; TLQGLEIELQSQLSMK; TLQGLEIELQSQLSMK Oxidation (M); ASLEGTLADTQAR; QGQEYQMLLDIK; QGQEYQMLLDIK Oxidation (M); TRLEMEIAEYR; TRLEMEIAEYR Oxidation (M); LEMEIAEYR; LEMEIAEYRR; LEMEIAEYRR Oxidation (M) |
| 23 | gI-18858425 | Q9PUB5 | U24 | 2.88,4.27 | U | 0/1 | 35 | NA | 23 | 58.551 | 5.34 | 147 | krt5 | Keratin 5 | MALDI MS/MSMS | NFSSMSTSAVPMGSR Oxidation (M); FLEQQNK; WSLLQEQTTTR; SNIDAMFEAYIANLR; SNIDAMFEAYIANLR Oxidation (M); SNIDAMFEAYIANLRR; MKLEGELK Oxidation (M); AAVENEFVLLK; AAVENEFVLLKK; VDSLQDEINFLR; AIFEEELR; AIFEEELRELQSQIK; NLDMDAIVAEVR; NLDMDAIVAEVR Oxidation (M); AQYEDIANR; SRAEAESWYK; AEIADLNR; LQNEIEAVKGQR; ANLEAQIAEAEER; ANLEAQIAEAEERGELAVK; IRDLEDALQR; LALDIEIATYR; KLLEGEESR |
| 24 | IPI00482837 | Q90487 | 4D3 | -5.12 | D | 0/12 | 11.89 | 1 | 1 | 15.5 | 8.37 | 2.32 | hbaa1 | Hemoglobin subunit α | FTMS/ITMSMS | TYFSHWADLSPGSGPVK |
| 25 | IPI00493081 | Q90486 | 4D5 | -4.56 | D | 0/12 | 10.81 | 1 | 1 | 16.4 | 7.83 | 6.06 | bal1 | Hemoglobin subunit β-1 | FTMS/ITMSMS | FGQAGFNADVQEAWQK |
| 26 | IPI00481037 | A4QN86 | 4D38 | -4.13 | D | 0/12 | 10.34 | 2 | 2 | 45.4 | 6.89 | 8.47 | krt1–19d | Keratin, type 1, gene 19d | FTMS/ITMSMS | ATHSAGGFSmSGSADNSSIIGNEK; GGLHLSIDNTSLAmNDFK |
| 27 | IPI00491770 | Q6ZM17 | 4D4 | -3.51 | D | 0/12 | 25.17 | 2 | 2 | 15.6 | 8.85 | 10.68 | hba2 | α-Globin-like (D. rerio) | FTMS/ITMSMS | TYFSHWSDLSPGSGPVKK; IDDLVGGLAALSELHAFK |
| 28 | IPI00502952 | F1R3G8 | 4D28 | -3.25 | D | 0/12 | 13.15 | 2 | 2 | 32.8 | 5.54 | 7.17 | SRM | Spermidine synthase | FTMS/ITMSMS | TYGNVLILDGVIQcTER; HPLVESVVQcEIDEDVINVSK |
| 29 | IPI00832708 | Q6P3L0 | 4D45 | -2.91 | D | 0/12 | 1.91 | 1 | 1 | 93.9 | 5.60 | 2.21 | mvp | Isoform 2 of major vault protein | FTMS/ITMSMS | LAQDPFPLYPGEEIQK |
| 30 | IPI00864129 | F1Q8P5 | 4D23/24 | -2.66 | D | 0/12 | 4.41 | 1 | 1 | 40.3 | 5.16 | 6.07 | Si:dkeyp-113d7.4 | Similar to type I cytokeratin, enveloping layer (D. rerio) | FTMS/ITMSMS | TLQGLEIELQSQLSmK |
| 31 | IPI00497231 | Q5XJE1 | 4D26 | -2.47 | D | 0/12 | 21.12 | 3 | 3 | 27.2 | 5.88 | 9.01 | cutc | CutC copper transporter homolog | FTMS/ITMSMS | VLTSGcDSSALEGLPVIK; SQQADGLVFGALTEDGR; NSNVcmGGSLSVPEYAVK |
| 32 | IPI00507097 | A7E2L4 | 4D32 | -2.41 | D | 0/12 | 18.61 | 3 | 3 | 35.1 | 7.69 | 13.09 | gnb2l1 | Guanine nucleotide-binding protein subunit β-2-like 1 | FTMS/ITMSMS | YTIQDDSHTEWVScVR; TNHIGHTGYLNTVTVSPDGSLcASGGK; IIVDELRQDIITTNSK |
| 33 | IPI00501589 | A7YYB3 | 4D39 | -2.13 | D | 0/12 | 3.96 | 1 | 1 | 48.1 | 7.87 | 3.91 | uqcrc2 | Ubiquinol-cytochrome c reductase core protein II | FTMS/ITMSMS | LPSGLVIASLENYSPASR |
| 34 | IPI00500466 | F1RDA6 | 4D44 | -2.13 | D | 0/12 | 2.74 | 1 | 1 | 79.4 | 6.15 | 7.51 | ndufs1 | NADH-ubiquinone oxidoreductase 75-kDa subunit | FTMS/ITMSMS | VASQVAALDLGYKPGVDAIR |
| 35 | IPI00502304 | Q7ZUD3 | 4D13 | -1.96 | D | 0/12 | 12.24 | 1 | 1 | 17.5 | 5.47 | 2.21 | Gmfb | Gmfb protein | FTMS/ITMSMS | QLVILEEEHEDISPEDLK |
| 36 | IPI00490809 | O73872 | 4D11 | -1.94 | D | 0/12 | 23.38 | 3 | 2 | 15.9 | 6.61 | 25.11 | sod1cuzn | Superoxide dismutase (Cu-Zn) | FTMS/ITMSMS | IEIEDAmLTLSGQHSIIGR; GTGEVTGTVYFNQEGEK |
| 37 | IPI00773343 | A5PN62 | 4D25 | -1.71 | D | 0/12 | 6.99 | 2 | 1 | 31.0 | 5.52 | 6.24 | ddah2 | Nγ,Nγ-Dimethylarginine dimethylaminohydrolase 2 (D. rerio) | FTMS/ITMSMS | NIcSmGGPDTIIISNSDGAK |
| 38 | IPI00509360 | Q6PC90 | 4D8 | -1.64 | D | 0/12 | 11.36 | 1 | 1 | 14.5 | 7.24 | 13.14 | rps12 | 40 S ribosomal protein S12 | FTMS/ITMSMS | LVEALcAEHQINLIK |
| 39 | IPI00866470 | NA | 4U29 | 1.61 | U | 0/12 | 7.61 | 2 | 2 | 53.0 | 7.59 | 13.83 | FDXR | NADPH:adrenodoxin oxidoreductase, mitochondrial-like (D. rerio) | FTMS/ITMSMS | VcVVGGGPAGFYTAQQLLK; ETDITQNALEALTGSNVR |
| 40 | IPI00489824 | Q6PHG2 | 4U27 | 1.8 | U | 0/12 | 4.25 | 1 | 1 | 51.0 | 6.64 | 2.14 | hpx | Hemopexin | FTMS/ITMSMS | GIEFDAVAVNEEGVPYFFK |
| 41 | IPI00506057 | Q7T3L3 | 4U40 | 2 | U | 0/12 | 10.47 | 8 | 5 | 91.2 | 4.86 | 40.21 | GP96 | Tumor rejection antigen (Gp96) 1 | FTMS/ITMSMS | LLSLTNEDALAGNEELTIK; FQTSHSDTVLSSLEQYVER; LTNSPcALVASQYGWSGNMER; EEEAIQLDGLNTSQLK; TDDEVVQREEEAIQLDGLNTSQLK |
| 42 | IPI00931368 | E7EXC4 | 4U26 | 2.02 | U | 0/12 | 4.28 | 1 | 1 | 42.4 | 9.04 | 2.30 | SERPINB1 | Leukocyte elastase inhibitor isoform 1 | FTMS/ITMSMS | VNLTGmSSSNDLVLSK |
| 43 | IPI00482097 | Q6AZC1 | 4U24 | 2.03 | U | 0/12 | 13.05 | 3 | 3 | 45.6 | 7.55 | 20.19 | Psmc5 | Proteasome (prosome, macropain) 26 S subunit, ATPase, 5 | FTMS/ITMSMS | EELQLLQEQGSYVGEVVR; EHAPSIIFmDEIDSIGSSR; TmLELLNQLDGFEATK |
| 44 | IPI00503192 | O42271 | 4U34 | 2.1 | U | 0/12 | 4.45 | 1 | 1 | 49.9 | 5.10 | 2.17 | tuba1 | α-Tubulin | FTMS/ITMSMS | TIGGGDDSFNTFFSETGAGK |
| 45 | IPI00482295 | Q7ZVI7 | 4U16 | 2.1 | U | 0/12 | 5.60 | 2 | 1 | 41.7 | 5.48 | 8.50 | actba | Actin, cytoplasmic 1 | FTMS/ITMSMS | DLYANTVLSGGTTMYPGIADR |
| 46 | IPI00855614 | A7YT77 | 4U5 | 2.15 | U | 0/12 | 12.24 | 1 | 1 | 24.6 | 7.08 | 2.81 | qdpra | Quinoid dihydropteridine reductase a | FTMS/ITMSMS | SLAGENSGLPSGAVAVAILPVTLDTPmNR |
| 47 | IPI00505818 | Q7SY26 | 4U14 | 2.17 | U | 0/12 | 7.14 | 1 | 1 | 32.1 | 6.99 | 2.16 | SEPT2 | Septin-2-like | FTMS/ITMSMS | LTVVDTPGYGDAINSQDcFK |
| 48 | IPI00851815 | E9QBP0 | 4U12 | 2.19 | U | 0/12 | 11.11 | 1 | 1 | 17.3/23 | 4.9/5.28 | 2.55 | ARHGDIB | Rho GDP-dissociation inhibitor 2 | FTMS/ITMSMS | SLQEIQEmDKDDESLTK |
| 49 | IPI00960571 | Q4VBT1 | 4U2 | 2.3 | U | 0/12 | 16.41 | 20 | 1 | 14.5 | 6.57 | 73.99 | fabp1b | Fatty acid-binding protein 1b-like | FTMS/ITMSMS | VLNNSFTIGQDTEIQmLSGDK |
| 50 | IPI00612220 | F1QEW2 | 4U39/40 | 2.33 | U | 0/12 | 2.46 | 2 | 1 | 66.4 | 6.67 | 4.75 | wu:fb15e04 | Thread biopolymer filament subunit α isoform 1 (D. rerio) | FTMS/ITMSMS | QITQYGQEYQELLASK |
| 51 | IPI00488563 | F1Q986 | 4U19 | 2.38 | U | 0/12 | 4.33 | 1 | 1 | 44.6 | 6.25 | 13.18 | hpdb | 4-Hydroxyphenylpyruvate dioxygenase | FTMS/ITMSMS | MAVVQTYGDTTHTFVER |
| 52 | IPI00484294 | Q6P3K5 | 4U35 | 2.38 | U | 0/12 | 9.72 | 61 | 3 | 59.1 | 5.41 | 219.48 | krt5 | Krt5 protein | FTMS/ITMSMS | ANLEAQIAEAEERGELAVK; TFTSSGSMSGGmGGGMGGGIR; SNIDAmFEAYIANLR |
| 53 | IPI00504269 | A4FUP0 | 4U9 | 2.42 | U | 0/12 | 16.32 | 16 | 3 | 33.4 | 7.05 | 129.51 | sult2st3 | SULT2 ST3 | FTMS/ITMSMS | ILYVTYEEMLQDLR; mASFLEDPGTFDDFVNK; mSNYTmVPQEImDNNK |
| 54 | IPI00861872 | F1R5A5 | 4U33 | 2.71 | U | 0/12 | 9.32 | 22 | 3 | 58.6 | 5.41 | 143.96 | krt5 | Type II cytokeratin | FTMS/ITMSMS | ANLEAQIAEAEERGELAVK; SNIDAmFEAYIANLR; TFTSSGSMSGGMGGGGIR |
| 55 | IPI00834037 | A9JRS6 | 4U41 | 3.08 | U | 0/12 | 6.83 | 5 | 2 | 54.2 | 5.48 | 36.35 | krt4 | Type II basic cytokeratin | FTMS/ITMSMS | ANLEAQIAEAEERGELAVK; SNIDAMFEAYISNLR |
| 56 | IPI00817939 | E9QEA9 | 4U8 | 3.19 | U | 0/12 | 10.81 | 2 | 1 | 21.1/32 | 6.9/7.4 | 6.75 | nqo1 | NAD(P)H dehydrogenase (quinone) 1 isoform 1 | FTMS/ITMSMS | VLTQGFAFSmQNmYDNGIFK |
| 57 | IPI00503919 | Q6PBY5 | 4U6 | 3.54 | U | 0/12 | 8.97 | 1 | 1 | 25.9 | 6.35 | 6.26 | psma2 | Proteasome subunit α type | FTMS/ITMSMS | LVQIEYALAAVAAGAPSVGIK |
| 58 | IPI00486296 | Q24JW6 | 4U30 | 3.73 | U | 0/12 | 13.75 | 8 | 3 | 47.8 | 6.58 | 27.00 | serpina1 | Serine (or cysteine) proteinase inhibitor, clade A (α-1 antiproteinase, antitrypsin), member 1, like | FTMS/ITMSMS | NIFFSPVGISMALSLLAVGAK; GVDAcHLLAPHNADFAFSLYK; LDDILmDmGmTDAFDYK |
| 59 | IPI00504274 | Q6P2V4 | 4U30 | 3.73 | U | 0/12 | 4.06 | 1 | 1 | 49.9 | 6.65 | 9.62 | Hgd | Homogentisate 1,2-dioxygenase | FTMS/ITMSMS | KVDFVSGLHTVcGAGDSK |
| 60 | IPI00498656 | Q1LXJ1 | 4U22 | 3.86 | U | 0/12 | 3.78 | 1 | 1 | 46.3 | 5.49 | 33.27 | Si:dkeyp-113d7.7 | Similar to type I cytokeratin | FTMS/ITMSMS | TLQSLQIELQSQLSmK |
| 61 | IPI00503138 | Q6DC81 | 1U1 | 1.7 | U | 0/24 | 16.41 | 2 | 1 | 14.7 | 5.96 | 7.57 | nutf2 | Nuclear transport factor 2 | FTMS/ITMSMS | LADLYTDAScLTWEGEGFQGK |
| 62 | IPI00498656 | Q1LXJ1 | 1U12 | 2.23 | U | 0/24 | 11.58 | 3 | 2 | 46.3 | 5.49 | 30.03 | Si:dkeyp-113d7.7 | Similar to type I cytokeratin | FTMS/ITMSMS | SYSAGGGAGFGGGAGAGFNLSDGIDSSANEK; SDLEmQIEGLKEELVFLK |
| 63 | IPI00960571 | Q4VBT1 | 1U5 | 2.37 | U | 0/24 | 16.41 | 1 | 1 | 14.5 | 6.57 | 34.87 | fabp1b | Fatty acid-binding protein 1b-like | FTMS/ITMSMS | VLNNSFTIGQDTEIQmLSGDK |
| 64 | IPI00919918 | Q8JJ15 | 1U3 | 2.51 | U | 0/24 | 18.10 | 1 | 1 | 11.7 | 8.18 | 4.41 | ba1 | Ba1 globin | FTMS/ITMSMS | YFATFGNLSSPAAIMGNPK |
| 65 | IPI00919918 | Q8JJ15 | 1U6/7 | 3.5 | U | 0/24 | 18.10 | 1 | 1 | 11.7 | 8.18 | 2.71 | ba1 | Ba1 globin | FTMS/ITMSMS | YFATFGNLSSPAAIMGNPK |
| 66 | IPI00503480 | B3DFP9 | 1U2 | 4.64 | U | 0/24 | 17.73 | 2 | 2 | 15.5 | 7.18 | 4.53 | apo14 | 14-kDa apolipoprotein | FTMS/ITMSMS | TAVEPALEGSPTAGSLKDVVEELKK; TAVEPALEGSPTAGSLKDVVEELK |
| 67 | IPI00960571 | Q4VBT1 | 1U4 | 4.72 | U | 0/24 | 29.69 | 3 | 2 | 14.5 | 6.57 | 17.23 | fabp1b | Fatty acid-binding protein 1b-like | FTMS/ITMSMS | VLNNSFTIGQDTEIQmLSGDK; TQFEIQENGNDYcLTTR |
| 68 | IPI00507672 | Q6NY48 | 2D32 | -5.5 | D | 0/48 | 5.50 | 1 | 1 | 43.0 | 6.46 | 2.60 | serpinb5 | Serpin peptidase inhibitor, clade B (ovalbumin), member 5, like | FTMS/ITMSMS | ALGmTDVFGDScDLSGmASGK |
| 69 | IPI00484493 | Q6P5M2 | 2D17 | -2.86 | D | 0/48 | 6.23 | 1 | 1 | 33.3 | 5.71 | 2.19 | wdr61 | WD repeat-containing protein 61 | FTMS/ITMSMS | SmDAGPVDAWTVAFSPDSK |
| 70 | IPI00500865 | Q1LYC9 | 2D9 | -2.53 | D | 0/48 | 8.33 | 1 | 1 | 24.4 | 5.47 | 6.12 | capns1a | Calpain, small subunit 1a | FTMS/ITMSMS | RPLAYAVSNESAEEQQFR |
| 71 | IPI00495855 | Q9PVK4 | 2D10 | -2.27 | D | 0/48 | 5.99 | 1 | 1 | 36.2 | 6.89 | 5.85 | ldhba | l-Lactate dehydrogenase B chain | FTMS/ITMSMS | GYTNWAIGLSVADLTETLVK |
| 72 | IPI00504248 | Q801W1 | 2D14 | -2.12 | D | 0/48 | 7.47 | 1 | 1 | 30.3 | 6.67 | 2.19 | psma2 | Proteasome subunit β type | FTMS/ITMSMS | IHYIAPNIYccGAGTAADTEK |
| 73 | IPI00482681 | A4QP88 | 2U34 | 1.95 | U | 0/48 | 3.60 | 1 | 1 | 68.3 | 7.28 | 2.13 | khsrp | khsrp KH-type splicing regulatory protein (D. rerio) | FTMS/ITMSMS | mGGGGGGGGGGGGGGGGIEVPVPR |
| 74 | IPI00486027 | Q6NWF6 | 2U21 | 2 | U | 0/48 | 2.88 | 1 | 1 | 57.7 | 5.22 | 21.08 | krt2–8 | Keratin, type II cytoskeletal 8 | FTMS/ITMSMS | SNIDAmFEAYIANLR |
| 75 | IPI00962525 | NA | 2U7 | 2.03 | U | 0/48 | 5.71 | 1 | 1 | 34.0 | 5.26 | 2.31 | natt1 | Natterin-like protein-like | FTMS/ITMSMS | QEYPIDVGSGYcLGIVGR |
| 76 | IPI00963174 | Q7SXK0 | 2U26 | 2.03 | U | 0/48 | 1.16 | 1 | 1 | 183.1 | 6.57 | 3.89 | c3 | Complement C3 (D. rerio) | FTMS/ITMSMS | VTVNTQGNVLTQEITAQTK |
| 77 | IPI00488901 | Q6P972 | 2U25 | 2.24 | U | 0/48 | 4.43 | 1 | 1 | 50.0 | 5.02 | 4.51 | tuba2 | Tubulin, α2 | FTMS/ITMSMS | TVGGGDDSFNTFFSETGAGK |
| 78 | IPI00886613 | Q1LXJ9 | 2U19 | 2.44 | U | 0/48 | 9.30 | 6 | 2 | 49.9 | 5.02 | 26.15 | krt1 | Novel protein similar to type I cytokeratin, enveloping layer | FTMS/ITMSMS | YSmQLSGYQAQVSGmEGQLVQLR; DQmSGQVNVEVDAAPQEDLTK |
| 79 | IPI00503480 | B3DFP9 | 2U2 | 2.6 | U | 0/48 | 17.73 | 1 | 1 | 15.5 | 7.18 | 2.55 | apo14 | 14-kDa apolipoprotein | FTMS/ITMSMS | TAVEPALEGSPTAGSLKDVVEELKK |
| 80 | IPI00508445 | Q7SZQ6 | 3D12 | -3.48 | D | 0/72 | 39.22 | 9 | 6 | 23.4 | 5.29 | 4.90 | arhgdig | Rho GDP dissociation inhibitor (GDI) γ | FTMS/ITMSMS | DVPVVEDEDEPDLNYQPPAQK; EKDVPVVEDEDEPDLNYQPPAQK; LTLmcDQAPGPITmDLTGDLNALK; KDWDGPEERPF; QTLLGSGPVVADPTIPNVQVTR; DWDGPEERPF |
| 81 | IPI00487156 | A7MBX1 | 3D19 | -2.46 | D | 0/72 | 8.92 | 1 | 1 | 24.3 | 5.22 | 0.00 | capns1b | Capns1b protein | FTMS/ITMSMS | QFRKVFQQLAGDDmEVSPK |
| 82 | IPI00614220 | E7FE19 | 3D23/24 | -2.45 | D | 0/72 | 21.27 | 7 | 5 | 45.0 | 4.54 | 1.77 | CNP | 2′,3′-Cyclic nucleotide 3′-phosphodiesterase-like (D. rerio) | FTMS/ITMSMS | EGTQVEmDmGTLSYLSEGR; EAITADTTFSSFSEDKPVSDQGK; VGVAPTLLPGVESLPAGSR; VALTETQLNLWPEGEDK; TLDTLEAFK |
| 83 | IPI00923195 | B8JKP3 | 3D15 | -2.42 | D | 0/72 | 15.15 | 3 | 2 | 26.2 | 5.38 | 1.69 | TPMT | Probable thiopurine S-methyltransferase | FTMS/ITMSMS | YLLDTLEYNPELYK; TVFGGScNIDLLQSVDGFEEK |
| 84 | IPI00482295 | Q7ZVI7 | 3D23 | -2.32 | D | 0/72 | 9.87 | 2 | 2 | 41.7 | 5.48 | 0.00 | actba | Actin, cytoplasmic 1 | FTMS/ITMSMS | DLYANTVLSGGTTmYPGIADR; SYELPDGQVITIGNER |
| 85 | IPI00497231 | Q5XJE1 | 3D16 | -2.1 | D | 0/72 | 26.69 | 6 | 4 | 27.2 | 5.88 | 5.60 | cutc | CutC copper transporter homolog | FTMS/ITMSMS | VLTSGcDSSALEGLPVIK; SQQADGLVFGALTEDGR; NSNVcmGGSLSVPEYAVK; ENVEIPVFVmIRPR |
| 86 | IPI00490093 | Q6GMI7 | 3D21 | -2.03 | D | 0/72 | 23.37 | 9 | 5 | 30.0 | 5.25 | 1.70 | enoph1 | Enolase-phosphatase E1 | FTMS/ITMSMS | IGcQPEEImFLTDVTR; IKGEVYQDVVPAIR; IITSFNQLELIGNV; VFLLDIEGTTTPITFVK; GEVYQDVVPAIR |
| 87 | IPI00492298 | Q5XJU1 | 3U13 | 1.67 | U | 0/72 | 23.30 | 6 | 5 | 32.8 | 7.88 | 2.24 | CaiD | Carnitinyl-CoA dehydratase-like | FTMS/ITMSMS | ELAHGSDSLELEQDVSSGPGPmGPSR; LPQLIGLSR; VAEESSImGVFcR; FGVPLIDGGTVR; AHEALAFGLANR |
| 88 | IPI00500949 | Q7T3A8 | 3U8 | 2 | U | 0/72 | 25.44 | 11 | 7 | 37.9 | 6.64 | 0.00 | anxa1a | Annexin A1a | FTMS/ITMSMS | GVDEPTIIDTLVHR; GAGTTEDTLIEILASR; AAYQQATSKPLDVALK; GTDcSVFIDILTSR; GDIEScLIAVVK; NALLSLcK; AIDLELK |
| 89 | IPI00960571 | Q4VBT1 | 3U2 | 2.33 | U | 0/72 | 23.44 | 3 | 2 | 14.5 | 6.57 | 2.38 | fabp1b | fatty acid binding protein 1b-like | FTMS/ITMSMS | VLNNSFTIGQDTEIQmLSGDK; YEGWEEFmK |
| 90 | IPI00501165 | Q7ZUM5 | 3U27 | 2.37 | U | 0/72 | 1.90 | 2 | 1 | 94.7 | 5.16 | 1.63 | hspa4 | Heat shock protein 4 | FTMS/ITMSMS | LmNETTAVALAYGIYK |