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. 2012 Jul 6;2(8):1867–1888. doi: 10.1002/ece3.304

Appendix 1.

Species, population, locus, and number of samples (N), alleles (A), expected (He), and observed (HO) heterozygosity. Inbreeding coefficient (FIS), null alleles (Null), corrected inbreeding coefficient (FISC). Large allele drop-out (LAD), not enough data (NED), not applicable (NA). Asterisks indicate significant deviations from Hardy–Weinberg equilibrium (P < 0.05).

Locus N A He HO FIS Null FISC
Acropora microphthalma Kimbe Bay 2 23 12 0.849 0.826 0.105 No 0.105
6 23 5 0.691 0.783 –0.147 No –0.147
28 23 6 0.509 0.435 0.096 No 0.096
22 NA NA NA NA NA No NA
23 23 6 0.778 0.652 0.136* No 0.136
7 22 6 0.478 0.045 0.92* Yes 0.119
10 25 10 0.728 0.72 0.031 No 0.031
12 25 6 0.406 0.32 0.232* No 0.232
Seychelles 2 22 8 0.747 0.611 0.141 No 0.141
6 22 7 0.638 0.529 0.191 No 0.191
28 22 20 0.787 0.389 0.515* Yes 0.169
22 NA NA NA NA NA NA NA
23 22 3 0.575 0.714 –0.171 No –0.171
7 22 7 0.702 0.591 0.181* No 0.181
10 22 12 0.778 0.545 0.32* Yes 0.267
12 22 6 0.635 0.318 0.516* Yes 0.115
Maldives 2 19 3 0.661 0.579 0.15 No 0.15
6 19 6 0.726 0.789 –0.061 No –0.061
28 19 7 0.74 0.684 0.102 No 0.068
22 NA NA NA NA NA NA NA
23 19 4 0.35 0.421 –0.176 No –0.176
7 19 5 0.56 0.333 0.566 Yes 0.186
10 19 5 0.738 0.533 0.176* Yes 0.16
12 19 5 0.616 0.867 –0.397 No –0.397
Orpheus Island 2 22 6 0.624 0.773 –0.216 No –0.216
6 22 5 0.636 0.818 –0.264 No –0.264
28 22 4 0.17 0.091 0.485 Yes –0.05
22 NA NA NA NA NA NA NA
23 22 4 0.458 0.273 0.423* Yes 0.133
7 22 5 0.522 0.409 0.238 No 0.238
10 22 6 0.667 0.864 –0.273 No –0.273
12 22 6 0.674 0.909 –0.329* No –0.329
A. valida Orpheus Island 2 28 6 0.596 0.357 0.281* Yes 0.028
6 25 6 0.728 0.52 0.238* Yes 0.105
28 26 13 0.877 0.654 0.231* Yes 0.225
22 NA NA NA NA NA NA NA
23 27 4 0.141 0.074 0.378 Yes 0.043
7 28 7 0.694 0.179 0* No 0
10 28 3 0.364 0.321 0.143 No 0.143
12 28 2 0.069 0 1* No 1
Heron Island 2 17 7 0.78 0.588 0.223 NED 0.223
6 13 3 0.506 0.077 0.727* NED 0.727
28 14 3 0.612 0 0.87* NED 0.87
22 NA NA NA NA NA NA NA
23 16 1 0 0 0 NED 0
7 NA NA NA NA NA NED NA
10 17 2 0.111 0.118 –0.045 NED –0.045
12 17 1 0 0 0 NED 0
Kimbe Bay 2 19 6 0.735 0.737 0 No 0
6 19 6 0.719 0.368 0.535* Yes 0
28 19 15 0.904 0.421 0.571* Yes 0.085
22 NA NA NA NA NA No NA
23 19 4 0.389 0.368 0.089 No 0.089
7 19 4 0.609 0.105 0* No 0
10 19 5 0.503 0.368 0.3* No 0.3
12 19 2 0.188 0 1* Yes 0.3
A. austera Majuro 2 12 4 0.462 0.417 0.141 No 0.141
6 12 4 0.66 0.417 0.405 No 0.405
28 12 4 0.601 0.25 0.612* Yes 0.12
22 NA NA NA NA NA NA NA
23 11 1 0 0 0 No 0
7 NA NA NA NA NA No NA
10 12 1 0 0 0 No 0
12 NA NA NA NA NA NA NA
Arno 2 14 5 0.666 0.857 –0.253 No –0.253
6 14 4 0.666 0.857 –0.253 No –0.253
28 10 4 0.27 0.3 –0.04 No –0.04
22 NA NA NA NA NA NA NA
23 14 2 0.191 0.214 –0.083 No –0.083
7 NA NA NA NA NA NA NA
10 14 1 0 0 0 No NA
12 NA NA NA NA NA NA NA
Maldives 2 28 7 0.733 0.786 –0.054 No –0.054
6 28 6 0.625 0.536 0.161 No 0.161
28 28 3 0.307 0.286 0.087 No 0.087
22 NA NA NA NA NA NA NA
23 29 3 0.511 0.586 –0.131 No –0.131
7 NA NA NA NA NA NA NA
10 29 6 0.728 0.655 0.118* No 0.118
12 29 6 0.702 0.448 0* No NA
A. papillare Ningaloo 2 28 3 0.07 0.036 0.5* Yes –0.038
6 28 4 0.563 0.179 0.692* Yes –0.041
28 28 6 0.735 0.357 0.528* Yes 0.028
22 25 9 0.788 1 –0.25* No –0.25
23 25 7 0.626 0.6 0.061 No 0.061
7 NA NA NA NA NA NA NA
10 28 7 0.721 0.571 0.225* Yes 0.015
12 26 5 0.57 0.462 0.208* No 0.208
Orpheus Island 2 20 7 0.639 0.75 0.164 No 0.164
6 20 3 0.411 0.2 0.532* Yes –0.282
28 20 8 0.8 0.8 0.026 No 0.026
22 20 14 0.814 1 –0.204 No –0.204
23 20 5 0.585 0.15 0.755* Yes –0.078
7 20 3 0.421 0.15 0* No 0
10 20 7 0.706 0.75 –0.036 No –0.036
12 20 4 0.554 0.8 –0.424 No –0.424
Japan 2 14 6 0.755 0.643 0.185* No 0.185
6 14 4 0.543 0.571 –0.015 No –0.015
28 14 4 0.707 0.071 0.906* NED 0.906
22 14 4 0.612 0.857 –0.368 No –0.368
23 14 4 0.199 0.143 0.316 No 0.316
7 14 4 0.487 0.643 0 No 0
10 14 5 0.691 0.714 0.004 No 0.004
12 14 1 0 0 0 No 0
A. millepora Orpheus Island 2 26 3 0.556 0.385 0.326 No 0.326
6 26 4 0.499 0.385 0.248* No 0.248
28 26 4 0.362 0.192 0.485* Yes 0.162
22 26 16 0.873 0.846 0.05 No 0.05
23 26 3 0.473 0.308 0.367* Yes 0.006
7 18 3 0.642 0 1* Yes 1
10 26 13 0.749 0.731 0.044 No 0.044
12 26 2 0.074 0.077 –0.02 No –0.02
Ningaloo 2 32 5 0.409 0.469 –0.131 No –0.131
6 32 5 0.445 0.156 0.658* Yes 0.168
28 33 6 0.786 0.394 0.51* Yes 0.155
22 33 12 0.805 0.727 0.112 No 0.112
23 33 7 0.597 0.515 0.152 No 0.152
7 32 7 0.754 0.219 0.718* Yes –0.084
10 33 13 0.865 0.576 0.348* Yes 0.102
12 33 7 0.648 0.333 0.498* Yes 0.022
A. pichoni Kimbe Bay 2 6 6 0.694 0.5 0.362 NED 0.362
6 6 3 0.611 0 1* NED 1
28 6 8 0.847 0.833 0.107 NED 0.107
22 NA NA NA NA NA NED NA
23 6 4 0.514 0.5 0.118 NED 0.118
7 2 2 0.375 0.5 0 NED 0
10 6 3 0.542 0.167 0.737 NED 0.737
12 6 6 0.806 0.667 0.259 NED 0.259
Truk 2 6 6 0.806 1 –0.154 NED –0.154
6 6 5 0.667 0.5 0.333 NED 0.333
28 6 7 0.806 0.833 0.057 NED 0.057
22 NA NA NA NA NA NED NA
23 6 2 0.375 0.5 –0.25 NED –0.25
7 2 3 0.625 0.5 0.5 NED 0.5
10 5 5 0.78 0.6 0.333 NED 0.333
12 6 6 0.806 0.333 0.643* NED 0.643
A. horrida Orpheus Island 2 26 3 0.144 0.038 0.742* Yes 0.059
6 26 8 0.803 0.346 0.582* Yes 0.019
28 26 10 0.686 0.346 0.51* Yes 0.067
22 22 8 0.834 0.364 0.579* Yes 0.012
23 23 4 0.427 0.565 –0.303 No –0.303
7 17 2 0.457 0 1* Yes –0.333
10 18 4 0.335 0.389 –0.133 No –0.133
12 18 5 0.466 0.611 –0.285 No –0.285
A. jacquelineae Orpheus Island 2 17 3 0.631 0.529 0.191 No 0.191
6 17 3 0.258 0.176 0.342 No 0.342
28 17 4 0.306 0.176 0.448 No 0.448
22 NA NA NA NA NA No NA
23 19 7 0.578 0.789 –0.343 No –0.343
7 11 3 0.657 0.545 0.216* No 0.216
10 11 4 0.442 0.455 0.02 No 0.02
12 11 2 0.236 0.091 0.643 No 0.643
A. kimbeensis Kimbe Bay 2 13 6 0.719 0.385 0.496* Yes 0.163
6 13 4 0.666 0.538 0.229 No 0.229
28 13 10 0.858 0.615 0.319 Yes 0.319
22 NA NA NA NA NA No NA
23 14 4 0.459 0.143 0.708* Yes 0.071
7 13 2 0.497 0.462 0.111 No 0.111
10 14 7 0.694 0.857 –0.2 No –0.2
12 14 4 0.656 0.429 0.378 No 0.378
A. tortuosa Rongelap Atoll 2 12 4 0.462 0.25 0.492* Yes 0.135
6 12 3 0.559 0.25 0.582* Yes –0.021
28 12 4 0.608 0.25 0.616* LAD 0.616
22 12 4 0.563 0.917 –0.603 No –0.603
23 12 2 0.153 0.167 –0.048 No –0.048
7 NA NA NA NA NA NA NA
10 12 2 0.278 0.333 –0.158 No –0.158
12 12 5 0.778 0.833 –0.028 No –0.028
A. kirstyae Orpheus Island 2 24 2 0.499 0.125 0.759* Yes –0.004
6 24 4 0.582 0.167 0.724* Yes –0.129
28 24 7 0.777 0.583 0.269 LAD 0.269
22 23 14 0.765 0.913 –0.173 No –0.173
23 23 7 0.433 0.348 0.218 No 0.218
7 22 5 0.249 0.136 0.471* Yes –0.122
10 23 5 0.631 0.826 –0.288 No –0.288
12 23 5 0.632 0.609 0.06* No 0.06
A. spathulata Orpheus Island 2 26 2 0.038 0.038 0* No 0
6 26 3 0.443 0.077 0.832* Yes –0.098
28 24 4 0.666 0.5 0.269* No 0.269
22 13 4 0.388 0.154 0.628* Yes 0.13
23 12 2 0.153 0.167 –0.048 No –0.048
7 NA NA NA NA NA No NA
10 20 8 0.8 0.9 –0.1 No –0.1
12 22 5 0.546 0.636 –0.142 No –0.142
A. walindii Kimbe Bay 2 14 2 0.408 0.571 –0.368 NED –0.368
6 13 2 0.426 0.154 0.662 NED 0.662
28 12 5 0.681 0.5 0.305 NED 0.305
22 14 3 0.518 0.5 0.071 NED 0.071
23 14 1 0 0 0 NED 0
7 2 1 0 0 0 NED 0
10 14 3 0.135 0.143 –0.02 NED –0.02
12 14 1 0 0 0 NED 0
A. rongelapensis Rongelap Atoll 2 12 6 0.722 1 –0.347* No –0.347
6 12 5 0.726 0.75 0.01 No 0.01
28 12 8 0.83 0.833 0.039* No 0.039
22 NA NA NA NA NA No NA
23 12 3 0.538 1 –0.846* No –0.846
7 12 4 0.726 0.917 –0.222* No –0.222
10 12 5 0.694 0.667 0.083 No 0.083
12 12 5 0.674 1 –0.451 No –0.451