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. 2012 Jul;194(13):3437–3447. doi: 10.1128/JB.00097-12

Table 2.

Oligonucleotides used in this study

Oligonucleotide Sequence
antisense1 TGCTCAATCTCACAAAGTGGA
antisense6 TTTTCTTGCAGAGTCTGGGTC
Fc-QC-Fw-CttC3 GGACTAAATTATCGCCCTTCCTGCGCTTTAAATGACC
Fc-QC-Rv-CttC3 GGTCATTTAAAGCGCAGGAAGGGCGATAATTTAGTCC
Fc-QC-Fw-aCa3 CTCACAAAGTGGACTACATTATCGCCATTACTGCGC
Fc-QC-Rv-aCa3 GCGCAGTAATGGCGATAATGTAGTCCACTTTGTGAG
Fc-QC-Fw-tCt CAAAGTGGACTAAATTCTCGCCATTACTGCGC
Fc-QC-Rv-tCt GCGCAGTAATGGCGAGAATTTAGTCCACTTTG
gapA-F TGAAAGGCGTTCTGGGCTACAC
gapA-R CGAAGTTGTCGTTCAGAGCGATACC
GSA-sense2 CCAGGTAGCGTTTCACTTCC
GSA-anti2 CAAACCAAAGGCGAAGAATC
GSA-sense3 CATGATTCTTCGCCTTTGGT
GSA-anti3 TTGCATACAGATTCGAATGGTGG
GSA-sense4 CCACCATTCGAATCTGTATGC
GSA-anti4 TCAATCTAGCAGTGGGTTTTC
GSA-sense5 GAAAACCCACTGCTAGATTGA
GSA-anti5 TGCTCAATCTCACAAAGTGGA
GSA-sense6 TCCACTTTGTGAGATTGAGCA
GSA-anti7 TTTTCTTGCAGAGTCTGGGTC
GSA-probe4.5-sense AAATGTTAAATTGAGTTTGC
GSA-probe4.5-anti ACTGCGCTTTAAATGACCTT
GSA-Probe5.5-sense2 AAGGTCATTTAAAGCGCAG
GSA-Probe5.5-antisense TCCATGCTCAATCTCACAAA
puuA-anti GCTCTAGATTACGCGTTTTTCAACATCC
puuA-sense1 CGGGATCCAAGATAAATGCCATCGAGTT
puuA-sense2 CGGGATCCATTCAGGTACTTTTCTTGCA
puuA-sense3 CGGGATCCGTTCATTATATTTTCCATGC
puuA-sense4 CGGGATCCGTTTTCATTTTTGCAAACTC
puuA-sense5 CGGGATCCGGTGGTCATTATATTTTACG
puuA-F AAGGAACCGAGAACAGGAACAC
puuA-R GCAATGGATATTCTGGGCAAC
puuA-RT2 GCAATGGATATTCTGGGCAAC
puuC-anti-primer CGCTTTATCCTGCCAGTAAGCC
puuC-sense-275 ATCTTTTTGTTCTGTAAGCCGGGT
puuD-RT1 TGGCTTAGTTGAGGCGGTTAG
puuD-RT2 CGTACTCGCTACTGTTCCATTCC
puuD + 60_anti_Afl2 GGGCTTAAGCCTGTTCCTGCACATTAC
puuD-100_sense CGGGGTACCGCAAAAATGAAAACCCACTG
puuD-155_sense CGGGGTACCCCACCATTCGAATCTGTATGC
puuD-190_sense CGGGGTACCTGTTTTCCGCTCGTTATCAA
puuD-220_sense CGGGGTACCCATGATTCTTVGCCTTTGGT
puuD-265_sense CGGGGTACCGCCTCTCTTCTGACTGCTGAA
puuE-RT2 TGATACGCGGTGTGGGTAAA
puuP-anti TAATTGCTGCCTCCCCTGCG
puuP-sense-270-GSA TTGTTTCATCGGCCTGAGCG
puuP-RT1 ATAAAGATAACGCCACCGTAGACC
puuR-1 GCGGATCCATGAGTGATGAGGGACTGGCGCCAGGAAAA
puuR-2 GCGGATCCTTAAAACGTGGTGGGCGTATGGGCGCTGAT
sense1 GGTTTGTTTTCCGCTCGTTA
sense4 CCACCATTCGAATCTGTATGC