Table 1.
Strain | Serotype | stxa | Special characteristics |
STd | CCe | Sourcef | Countryf | Yearf | Accession no. or reference | ||
---|---|---|---|---|---|---|---|---|---|---|---|
GUDb | SORc | Plasmid | |||||||||
Sakai | O157:H7 | 1,2 | − | − | pO157 | 66 | A6 | Human | Japan | 1996 | NC_002695 |
EDL933 | O157:H7 | 1,2 | − | − | pO157 | 66 | Food | USA | 1982 | AE005174 | |
EC4115 | O157:H7 | 1,2 | − | − | pO157 | 66 | Food | USA | 2006 | NC_011353 | |
TW14359 | O157:H7 | 1,2 | − | − | pO157 | 66 | ? | USA | 2006 | CP001368 | |
EDL931 | O157:H7 | 1,2 | − | − | pO157 | 66 | Human | USA | 1983 | 24 | |
MA6 | O157:H7 | 2 | − | − | pO157 | 66 | Food | Malaysia | 1998 | 11 | |
550654 | O157:H7 | 2 | − | − | pO157 | 66 | ? | USA | 2009 | ||
FDA 413 | O157:H7 | 2 | − | − | pO157 | 66 | ? | ? | ? | 11 | |
G5101 | O157:H7 | 1,2 | + | − | pO157_2 | 65 | A5 | Human | USA | 1995 | 12 |
TW06289 | O157:H7 | 1,2 | + | − | pO157_2 | 65 | ? | USA | 1997 | 25 | |
TW06290 | O157:H7 | 1,2 | + | − | pO157_2 | 65 | ? | USA | 1997 | 12 | |
EC97144 | O157:H7 | 1,2 | + | + | pO157_2 | 65 | ? | Japan | 1997 | 8 | |
EC96038 | O157:H7 | 1,2 | + | + | pO157_2 | 65 | ? | Japan | 1996 | 12 | |
EC96012 | O157:H7 | 1,2 | + | + | pO157_2 | 65 | ? | Japan | 1996 | 12 | |
493-89 | O157:H− | 2 | + | + | pSFO157 | 75 | Human | Germany | 1989 | 12 | |
5412-89 | O157:H− | 2 | + | + | pSFO157 | 75 | A4 | Human | Germany | 1989 | 24 |
H56929 | O157:H− | 2 | + | + | pSFO157 | 76 | ? | Finland | 1999 | 12 | |
H56909 | O157:H− | 2 | + | + | pSFO157 | 76 | ? | Finland | 1999 | 12 | |
H1085c | O157:H− | 2 | + | + | pSFO157 | 76 | Cat | Scotland | 2003 | 12 | |
H2687 | O157:H− | 2 | + | + | pSFO157 | 76 | Human | Scotland | 2003 | 12 |
stx, Shiga toxin gene.
GUD, β-glucuronidase activity.
SOR, sorbitol fermentation.
ST, sequence type as determined by a combination of seven genes (http://www.shigatox.net/ecmlst/cgi-bin/dst).
CC, clonal complex (12).
?, Unknown.