Table 2. Polymorphisms in A. thaliana HMA2 and HMA3 between Col-0 and CS28181.
DNA nucleotidea | Position | Region affected | Amino acid residue | |||||
Col-0 | Cs28181 | HMA2G b | HMA2C c | HMA3G b | HMA3C c | Col-0 | CS28181 | |
A | G | 4235 | 2766 | 13160 | Exon | C | C | |
C | T | 3744 | 2275 | 12669 | Exon | A | T | |
G | A | 1506 | 10431 | Intron | ||||
C | T | 868 | 391 | 9793 | Exon | A | T | |
T | G | 505 | 9430 | Intron | ||||
T | A | −391 | 8534 | Promoter | ||||
T | A | −392 | 8533 | Promoter | ||||
C | G | −3530 | 5395 | Intergenic | ||||
A | C | −3531 | 5394 | Intergenic | ||||
G | A | −4146 | 4779 | Intergenic | ||||
G | A | −4472 | 4453 | Intergenic | ||||
A | G | −5293 | 3632 | Intergenic | ||||
- | A | −6554 | 2371 | 1628 | Exon | * | L | |
C | A | −6947 | 1978 | 1343 | Exon | R | I | |
A | T | −7113 | 1812 | 1276 | Exon | Y | N | |
G | A | −7467 | 1458 | Intron | ||||
A | G | −7727 | 1198 | Intron | ||||
C | A | −9226 | −301 | Promoter | ||||
C | A | −9419 | −494 | Promoter | ||||
C | G | −9524 | −599 | Promoter | ||||
A | G | −9627 | −702 | Promoter | ||||
T | C | −10155 | −1230 | Promoter | ||||
A | - | −10155 | −1230 | Promoter |
Nucleotide on the forward genomic strand.
Indicates gDNA sequence.
Indicates cDNA sequences.
indicates stop codon. The position of nucleotides is relative to start codons of HMA2 or HMA3.