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. 2012 Sep 6;7(9):e44730. doi: 10.1371/journal.pone.0044730

Table 1. Oligonucleotides primer sequences for PCR and probe preparations.

Targeted genomic Island Sequence (5′–3′) Amplicon (bp) Annealing temperature
G1 F GCACTCAAAGGGGCTAAAG 1046 55°C
R GAAGATAATACGGCGGAATACAAT
G2 F TCTAAATTCATCGGAGTA 570 48°C
R TTTTGAGGGTTATATGAATGTC
G6 F GTAAAAGCGTGCGTGATGGTATGG 1334 63°C
R CGCTGTTTGTGCCGTTGCTAAG
G8 F ATTGGGTTATATTTTTCTGTC 814 50°C
R AATCCCTTTGCTACCATCA
G9 F TAACTTCAACAATAGGTCGTCCAG 444 52°C
R TATCTTCTATTTTAACATCTAC
G10 F ACGCGCTTTAATTGTTTGGTAGA 1603 58°C
R TTTTTGGGTGATATTGTGCTTTAG
G11 F CAAAGATTATGGCTACCTA 616 50°C
R GTTATATTTTCTTACACTCTCC

Note: Product sizes are based on 6P18H1 genome. F – forward primer; R – reverse primer.