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. 2012 Sep 6;7(9):e44678. doi: 10.1371/journal.pone.0044678

Table 2. k-means clustering of CaCx cases portraying purely integrated HPV16 genomes.

Serial number Sample ID ln(Viral Load) per 100 ng DNA E7 CT(APOT-coupled-quantitative-RT-PCR) Cluster Distance from cluster centre
1 T330 4.8 37.53 1 2.108
2 T267 7.83 36.56 1 1.656
3 T259 6.86 39.11 1 1.198
4 T263 7.3 39.34 1 1.491
5 T261 7.48 36.02 1 1.987
6 T228 6.97 38.91 1 1.003
7 T326 17.71 33.65 2 2.817
8 T265 16.46 38.28 2 1.979
9 T156 18.97 35.07 2 2.355
10 T239 15.77 35.48 2 1.535
11 T233 15.18 38.52 2 2.818
12 T244 17.99 37.28 2 1.328
13 T328 17.66 15.18 3 3.996
14 T336 13.81 9.8 3 2.825
15 T345 9.28 12.7 3 5.445
16 T333 16.78 11.01 3 2.527
17 T344 16.07 13.68 3 1.81
18 T321 11.26 2.74 4 1.933
19 T327 7.45 2.08 4 1.933

Cluster 1 : samples with low viral load, low E7 expression; Cluster 2: samples with high viral load, low E7 expression; Cluster 3: samples with moderate viral load, moderate E7 expression; Cluster 4: samples with low to moderate viral load, high E7 expression.