Table 1.
Nuclear ribosomal and mitochondrial DNA haplotype code identification for lymnaeid species and populations studied from Cajamarca, Peru
| Lymnaeid species |
Populations |
rDNA ITS-2 |
rDNA ITS-1 |
mtDNA 16S |
mtDNA cox 1 |
Combined H nomenclature | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locality | Latitude (S) | Longitude (W) | Altitude | H | Acc. No. | H | Acc. No. | H** | Acc. No. | H** | Acc. No. | ||
|
G. truncatula |
Encañada, Encañada district N = 97/10/0; D = 9.7 |
07°05′21′ |
78°20′41″ |
3,130 m |
1 |
AJ296271 |
E* |
HE610430 |
B* |
HE610432 |
d* |
HE610435 |
G.tru-1E,16SB,cox1d |
| |
Santa Rosa de Chaquil, Encañada districtN = 595/10/2; D = 119.0 |
07°07′48″ |
78°21′06″ |
3,038 m |
1 |
AJ296271 |
E* |
HE610430 |
B* |
HE610432 |
d* |
HE610435 |
G.tru-1E,16SB,cox1d |
| |
Tauripampa, Llacanora district N = 452/10/2; D = 90.4 |
07°10′19″ |
78°24′26″ |
2,890 m |
1 |
AJ296271 |
E* |
HE610430 |
B* |
HE610432 |
d* |
HE610435 |
G.tru-1E,16SB,cox1d |
| |
Baños del Inca (loc. B), Baños del Inca district N = 10/4/0; D = 10.0 |
07°10′14″ |
78°27′59″ |
2,655 m |
1 |
AJ296271 |
E* |
HE610430 |
B* |
HE610432 |
d* |
HE610435 |
G.tru-1E,16SB,cox1d |
| |
Yanamarca, Jesus district N = 861/10/0; D = 287.0 |
07°12′54″ |
78°26′08″ |
2,633 m |
1 |
AJ296271 |
E* |
HE610430 |
B* |
HE610432 |
d* |
HE610435 |
G.tru-1E,16SB,cox1d |
| |
Chaquicocha, Cajabamba district N = 15/4/0; D = 7.5 |
07°32′07″ |
78°08′58″ |
2,080 m |
1 |
AJ296271 |
E* |
HE610430 |
B* |
HE610432 |
d* |
HE610435 |
G.tru-1E,16SB,cox1d |
|
L. neotropica |
Valle de Condebamba, Cajabamba district N = 6/3/0; D = 6.0 |
07°36′16″ |
78°05′16″ |
2,390 m |
1 |
AM412225 |
A |
AM412228 |
A* |
HE610433 |
a* |
AM494008 |
L.neo-1A,16SA,cox1a |
| L. schirazensis | Baños del Inca (loc. A), Baños del Inca district N = 72/3/0; D = 14.4 | 07°09′44″ | 78°28′03″ | 2,665 m | 1 | JF272601 | B | JF272604 | A | JF272605 | d | JF272610 | L.schi-1B,16SA,cox1d |
H = haplotype; N = lymnaeid specimens collected in each locality/ lymnaeid specimens sequenced/ lymnaeid specimens with Fasciola hepatica larval stages sequenced. . D = population density estimates for each locality, in number of lymnaeids collected by four persons per 1 m in 1 hour. * = new haplotypes for the corresponding lymnaeid species deposited in EMBL; ** = only preliminary haplotypes due to incomplete gene sequence. For the geographical situation of localities, see Figure 1.