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. 2012 Sep 3;28(18):i589–i595. doi: 10.1093/bioinformatics/bts373

Fig. 3.

Fig. 3.

Visualization example of a prediction: This plot shows the visualization of the positional weights as described in the Methods section for one test sequence during one of the nested CV runs of geno2pheno-CNGS–Sanger. The letters are depicted in different colors according to the positional weights. The red color corresponds to the at risk of X4 emergence class. Positions that make the sequence more similar to no risk of X4 emergence sequences are marked in green. The higher the positional weight, the larger is the corresponding letter