Table 3.
Comparative sequence analysis of single cysts from Sweh212 at thebglocus
|
Sub-assemblageIsolate |
Material |
GenBank acc no |
Nucleotide position from start of gene |
||
|---|---|---|---|---|---|
| 354* | 369 | 516 | |||
|
BIII/ BAH8 |
|
AY072727 |
C |
C |
T |
|
BIV/ Nij5 |
|
AY072725 |
T |
C |
T |
|
Sweh212 |
Crude stool isolate |
JN579687 |
T |
Y |
Y |
|
Sweh212_143 |
Single cyst |
JN579688 |
T |
Y |
Y |
|
Sweh212_145 |
|
|
T |
Y |
Y |
|
Sweh212_136 |
Single cyst |
HM165216 |
T |
T |
C |
|
Sweh212_243 |
|
|
T |
T |
C |
|
Sweh212_236 |
Single cyst |
HM165214 |
T |
C |
T |
| Sweh212_242 | T | C | T | ||
* This nucleotide position is a substitution pattern proposed as a marker for different B sub-assemblages [10].