TABLE 2.
Characteristics of enhancer-associated histone modifications
| Modification | Description | Refs. |
|---|---|---|
| H3K4me1/2 | Associated with active, intermediate, and poised enhancers | 22–24, 30, 31, 33, 58 |
| Widely considered to be the chromatin signature of enhancer elements | ||
| May be necessary for recruitment of pioneer factors (i.e. FOXA1) | ||
| H3K9me3 | Associated with poised enhancers | 33, 34 |
| Established by SETDB1 | ||
| H3K27ac | Associated with active enhancers | 30, 31, 33, 46–48 |
| Established by P300 | ||
| H3K27me3 | Associated with poised enhancers | 31–33 |
| Established by Polycomb-group protein EZH2 | ||
| H3K36me3 | Associated with active enhancers | 33, 36, 38 |
| pol II is also present at H3K36me3-marked enhancers, consistent with ncRNA transcription from these enhancers |