Figure 4.

Read graph-based global haplotype reconstruction. Shown is the read graph for the first 15 reads of the MSA shown in Figure 2. Each read is represented by its index and colored according to its parental haplotype (A, blue, first row; B, orange, second row; and C, green, third row). Reads are connected by a direct edge if they agree on their non-empty overlap. Each path from the begin node to the end node represents a potential global haplotype, but there are more paths in the graph than the original three haplotypes the reads have been derived from.