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. Author manuscript; available in PMC: 2012 Sep 11.
Published in final edited form as: J Immunol. 2008 May 1;180(9):5843–5852. doi: 10.4049/jimmunol.180.9.5843

Table I.

Aerobic, facultative anaerobic, and anaerobic cecal cultures from RF and SPF micea

Aerobic Culture
Isolate Description Identification RF-1 RF-2 RF-3 RF-4 SPF-1 SPF-2 SPF-3 SPF-4
Gram-positive pleomorphic rod Lactobacillus spp. Many Many Many Modb Mod Mod Many Few
Gram-positive, coagulase-negative cocci in clusters Staphylococci coagulase negative few Mod Few Mod Few Few Many Few
Gram-positive, γ-hemolytic, catalase-negative cocci in pairs and chains Enterococcus spp. Few Rare Many Few
Gram positive, á-hemolytic, catalase negative cocci in pairs and chains Enterococcus-like organism Rare Rare Rare
Gram-positive rod (possible two morphotypes wrinkled and mucoid) Bacillus spp. Rare Rare Rare (mucoid) Rare (mucoid)
Gram-negative, lactose-positive rod (possible two morphotypes) Enterobacter cloacae Few Few
Large Gram-negative rod B. fragilis group Mod Mod Many Many Mod Mod Many Mod
Unusual Gram- negative rod but SSR indicating Gram-positive organism Possible Prevotella spp. Many Many Many Many
Anaerobic Gram -positive rod (SRS, flat regular) Gram-positive rod 1 Many Many
Anaerobic Gram-positive rod (SRS, flecked colony) Gram-positive rod 2 Mod
Anerobic Gram -positive rod (SRS, small) Gram-positive rod 3 Many
Anaerobic Gram- negative rod (RSS resistant to vancomycin) Fusobacteriumspp. Few
a

Each column (RF-1, RF-2, etc.; SPF-1, SPF-2, etc.) presents results from cultures of individual RF and SPF mice, respectively.

b

Mod, Moderate; S, susceptible and R, resistant to vancomycin (5 μg), colistin (10 μg), and kanamycin (1,000 μg), respectively.