Table 4.
Twenty four prokaryotic species with diversity >3% due to 5S-23S spacer length difference
Species | Copy of genes | 5S diversity % | ||
---|---|---|---|---|
5S | 16S | 23S | ||
Archea: Euryarchaeota (n=1) | ||||
Methanosarcina acetivorans | 3 | 3 | 3 | 4.44 |
Bacteria: Actinobacteria(n=3) | ||||
Thermobispora bispora | 3 | 4 | 3 | 6.84 |
Streptomyces avermitilis | 6 | 6 | 6 | 6.25 |
Streptomyces griseus subsp. griseus | 6 | 6 | 6 | 3.70 |
Bacteria: Firmicutes (n=16) | ||||
Desulfotomaculum acetoxidans | 9 | 10 | 11 | 22.86 |
Bacillus megaterium | 12 | 11 | 11 | 14.78 |
Eubacterium rectale | 5 | 5 | 5 | 8.55 |
Bacillus subtilis subsp. subtilis | 10 | 10 | 10 | 6.90 |
Bacillus weihenstephanensis | 14 | 14 | 14 | 6.03 |
Lactobacillus salivarius | 7 | 7 | 7 | 6.03 |
Bacillus amyloliquefaciens | 10 | 10 | 10 | 5.93 |
Bacillus pumilus | 7 | 7 | 7 | 5.88 |
Geobacillus thermodenitrificans | 10 | 10 | 10 | 5.51 |
Clostridium ljungdahlii | 9 | 9 | 9 | 4.39 |
Bacillus anthracis | 11 | 11 | 11 | 4.31 |
Bacillus thuringiensis | 14 | 14 | 13 | 4.31 |
Clostridium novyi | 10 | 10 | 10 | 4.17 |
Exiguobacterium sibiricum | 9 | 9 | 9 | 3.48 |
Bacillus cereus | 13 | 13 | 13 | 3.45 |
Clostridium botulinum | 8 | 8 | 8 | 3.42 |
Bacteria: Gammaproteobacteria (n=4) | ||||
Psychromonas ingrahamii | 11 | 10 | 10 | 15.45 |
Shewanella loihica | 9 | 8 | 8 | 4.41 |
Shewanella halifaxensis | 10 | 10 | 10 | 3.45 |
Pseudomonas stutzeri | 4 | 4 | 4 | 3.33 |