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Summary of de novo sequence assembly
| Sequences (n) | Base pairs (Mbp) | Length range (bp) | Mean length (bp) | N50 (bp) | |
|---|---|---|---|---|---|
| Clean reads |
52,081,238 |
4,687.31 |
90-90 |
90 |
90 |
| SOAP contigs |
336,641 |
60.21 |
60-3911 |
200 |
229 |
| Trinity contigs |
481,672 |
92.50 |
75-3696 |
192 |
250 |
| SOAP unigenes |
130,487 |
45.86 |
150-4113 |
351 |
392 |
| Trinity unigenes | 118,064 | 59.09 | 200-4214 | 500 | 599 |
