Table 2.
Length and number distribution of the unigenes and contigs
| Length range (bp) |
SOAPdenovo |
Trinity |
||
|---|---|---|---|---|
| Contig No. | Unigene No. | Contig No. | Unigene No. | |
| <200 |
242,275 |
37,828 |
383,651 |
0 |
| 200-299 |
51,635 |
42,043 |
41,094 |
41,031 |
| 300-399 |
19,366 |
19,062 |
18,886 |
23,299 |
| 400-499 |
9,163 |
10,457 |
9,454 |
13,917 |
| 500-999 |
11,480 |
16,395 |
17,193 |
29,195 |
| 1000-1999 |
2,497 |
4,120 |
8,913 |
10,027 |
| 2000-3000 |
208 |
505 |
1969 |
572 |
| >3000 |
17 |
77 |
512 |
23 |
| Total | 336,641 | 130,487 | 481,672 | 118,064 |