Skip to main content
. 2012 Apr 28;40(16):e121. doi: 10.1093/nar/gks333

Table 2.

Probabilistic interpretation of the in-cell FRET data

bp A-DNA B-DNA
8 0.87 0.60
10 0.92 0.81
12 0.80 0.67
14 0.51 0.39
16 0.65 0.43

Quantification of a distance between the ‘in-cell’ PDFs simulated using FRET NPS tools (22) for A- and B-form of DNA and ‘reference’ interprobe distance PDFs derived from in-cell FRET measurements using the Kolmogorov–Smirnov (KS) statistic. Identical distributions are marked by 0 value in the KS statistics. Note that B-DNA model has lower KS values compared to A-DNA model for all the DNA constructs indicating the B-form of DNA to be a more likely conformation in intact bacterial cells compared to A-DNA.