PSII maximum photochemical yield (FV/FM) correlates with content of functional PSII determined from oxygen evolution. T. pseudonana cultures were grown at 18°C under 30, 90, 180, or 270 μmol photons m−2 s−1 for many generations. We used a modulated fluorometer to measure FV/FM and an oxygen flash yield protocol to determine their content of active PSII. We then shifted the cultures to 90, 180, 270, 450, 1,000, 1,400, 1,800, or 2,200 μmol photons m−2 s−1 for 30 to 90 min, with or without lincomycin, and then remeasured FV/FM and active PSII content. open circles: cultures measured with active PSII repair; closed circles: cultures measured in the presence of the chloroplast translation inhibitor lincomycin to block PSII repair. Line shows the linear regression for the pooled data since an F test found no significant difference between the slopes for the data with or without lincomycin. R2 = 0.89, dotted lines show 95% confidence interval for linear regression line. y intercept for pooled data = 33.6% ± 2.3%. Diatom PSII photoinactivation, repair, and protection.