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. 2012 Sep 12;7(9):e44703. doi: 10.1371/journal.pone.0044703

Table 1. Antisense sequences and positions of siRNAs used for inhibition.

Name Sequence Nt Position (5′ –3′) Genome region
Q1 5′ – UAUAACGCCCAGUUCGGCCUU –3′ 10730 3′UTR
Q2 5′ – UUGACGGAACGAACCAGGCUG –3′ 5688 NS3
Q3 5′ –UUGAGUUCACUACUCCGGCAU–3′ 3159 NS1
Q4 5′ – UAGUAUGACCAGCCGCCUCUG –3′ 7912 NS5
Q5 5′ – UUAGAUGAUACUUAGUUCCCT –3′ 1800 Env
Q6 5′ – UCUGAUGACACUGUGAACGAG –3′ 1459 Env
D1 5′ – UUUCUCUCUUCCCUCCUCCUU –3′ 10777 3′UTR
D2 5′ – UCAUCCACAGACUUUGAUCUU –3′ 3047 NS1
D3 5′ – UUUCUCAACACGUUCACGAUU –3′ 83 5′UTR
D4 5′ – AUGCUCAUGUGUCUUGUCCUU –3′ 1576 Env
D5 5′ – UUCUGCAAGGCCUAGUUCCUU –3′ 1970 Env
D6 5′ – UUCCACUCCAAUCAUGAACUU –3′ 2857 NS1
D7 5′ – AUAUCCACAAUCACAGUCGUU –3′ 47 5′UTR
D8 5′ – AUUCCCAGCUCUUGUUCUCUU –3′ 114 5′UTR
D9 5′ – AAUCCAUCCACCAUCAACCUU –3′ 897 pre M
D10 5′ – UUUCCCGUCACCACUCUCAUU –3′ 10651 3′UTR
D11 5′ – UCUCCCUCGAGCCAUUGGUUU –3′ 795 pre M
D12 5′ – UUUAGAACGGCCUUCCCGGUU –3′ 135 Core
D13 5′ – AAGUCCAUUUGGCAUUUGGUU –3′ 223 Core