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. 2012 Sep 12;7(9):e44333. doi: 10.1371/journal.pone.0044333

Table 1. Genomic regions covered by sequences of CNGZD.

CDS Positionin HXB2 Amino acidin HXB2 Position in CNGZD
NCR 654–789 7–52 1–136
Gag 790–2292 1–501 137–1624
p17 790–1185 1–132 137–523
p24 1186–1878 1–231 524–1216
p2 1879–1920 1–14 1217–1252
p7 1921–2085 1–55 1253–1417
p1 2086–2133 1–16 1418–1465
p6 2134–2292 1–53 1466–1624
Pol 2085–5096 1–1004 1417–4428
p2p7p1p6 1879–2292 1–138 1217–1624
GagPolTF 2085–2252 1–56 1417–1584
Protease 2253–2549 1–99 1585–1881
RT 2550–3869 1–440 1882–3201
RNase 3870–4229 1–120 3202–3561
Integrase 4230–5096 1–289 3562–4428
Vif 5041–5619 1–193 4373–4954
Vpr 5559–5850 1–98 4894–5184
Tat1 5831–6045 1–72 5165–5379
Rev1 5970–6045 1–26 5304–5379
Vpu 6062–6310 1–83 5396–5641
gp160 6225–8795 1–857 5559–8132
gp120 6225–7757 1–511 5559–7073
gp41 7758–8795 1–346 7074–8132
Tat2 8379–8469 1–31 7695–7785
Rev2 8379–8653 1–92 7695–7990
Nef 8797–9417 1–207 8133–8750
LTR3 9086–9673 1–184 8419–8992

All the coding sequences (CDSs) in CNGZD were pointed out and the corresponding position of each CDS in the virus genome was indicated in both submitted sequence and HIV-1 reference strain HXB2 by the online software HIV Sequence Locator.