Table 2. Biologic parameters for modeling of SIV-specific CD8+ T lymphocyte compartment.
Parameter | Definition | Value |
IniNR | Initial number of naïve SIV-specific CTLs in a macaque | 8.75×104 [44], [49] * |
α | Factor for naïve SIV-specific CTL activation relative to virus production | 5×10−9/cell/day [29] |
δNR | Naïve (resting) CTL death rate | 10−3/day [45], [46] |
βCD8 | Production rate of naïve SIV-specific CTLs | 87.5 cells/day** |
DCD8 | Number of CTL divisions after antigenic stimulation | 8 [36], [37] |
Revert | Reversion rate of activated CTLs returning to resting | 5×10−2 [36], [51] |
δMR | Memory resting CTL death rate | 3×10−2/day [52], [53], [54] |
Memory Factor | Ratio of memory versus naïve CTL activation rates | 7 [46], [47] |
CCnaive | Mitosis time for naïve CTLs | 12 hours [55] |
CCmemory | Mitosis time for memory CTLs | 6 hours [55] |
NCTLd | Doublings for a naïve CTL to become an effector CTL | 4 doublings [55] |
MCTLd | Doublings for a resting memory CTL to become an effector CTL | 1 doubling [55] |
The biological constants utilized for modeling of SIV-specific CTLs are listed.
Based on Sopper et al describing a total body number of 3.5×109 CD8+ T lymphocytes and Blattman et al demonstrating the frequency of epitope precursors to be 5×10−6, and assuming a persisting CTL response to 5 epitopes.
Derived constant calculated from biologically observed steady state value for total body CTLs, frequency of epitope-specific CTLs and loss rate of epitope-specific CTLs (see Supplemental Methods).